Gene Tcr_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1875 
Symbol 
ID3761088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2050836 
End bp2051783 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content49% 
IMG OID637786618 
Productputative GTP cyclohydrolase 
Protein accessionYP_392139 
Protein GI78486214 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGC ACATGCCCGA TATCGCTTGC CAGCCCCACC AAGACCCACA AGGCAAACTG 
AACTGGGTCG GAATGAGTGG CATAGAACTG CCAATCAAAA TCGAACAAGA TTCGCAAACC
TTAACCCTTT CATCACAAGT TCAAGCTTAC GTCAGTCTCG ATGACCCTTT AAGCAAAGGC
ATCCACATGT CTCGACTGTA CTTGATACTT GATGAAATGG GTTCGAATGC ACCTCTTAAC
CCGGCCAGCA TTCAAACCCT GTTAACAGCG TTTATCGAAT CACACCAAGG ACTGAGTCAA
AATGCCTTTG TGGAATTTCG ATTTGATTAC TATGAAAGAC GCCGCTCGCT CAAATCAGAT
AACTCTGGTT GGAAACACTA CCCCTGCACC CTAAGGGGCG AAATGCGAAA CGGTCAATTT
GAGTGTGAAA TCAGCATCAG CGTGCCGTAT TCCTCCACTT GCCCTTGTTC AGCTGCGCTC
TCACGCCAAC TGATTCAAGA AGCCTTTGAA CAACAGTTCA ATGGTCAGGA TTTGGATTAC
AACCAAGTAT TGGAATGGCT CGGCACGCCG GAAGGCATTT GTGCCACGCC GCACAGCCAA
CGCTCTTATG CGCAGGTCAA ACTGAAGGTG AATGCCGAGC ACCCATTAAA CTTATCCAAC
GTCATCAACC AGATTGAAGA CGCGGTTAAG ACACCGGTGC AATCGACGGT GAAACGTGAA
GACGAGCAAG AGTTTGCCCG TTTGAACGCC ACCAACCTAA TGTTCTGTGA AGATGCCGCG
CGCCGCTTAC AAGCCAAATT GGAAAGCTGT CCGGAATACA AAGACTACTG GGTGCGCGTC
AATCACTTGG AAAGCTTACA CCCACACGAC GCGGTGGCCA TTGTCACTAA AAACGTGCCG
GGCGGTTATT CCGATGAACC GAACTTTATG GAACGCTTCC AAAACTAA
 
Protein sequence
MTKHMPDIAC QPHQDPQGKL NWVGMSGIEL PIKIEQDSQT LTLSSQVQAY VSLDDPLSKG 
IHMSRLYLIL DEMGSNAPLN PASIQTLLTA FIESHQGLSQ NAFVEFRFDY YERRRSLKSD
NSGWKHYPCT LRGEMRNGQF ECEISISVPY SSTCPCSAAL SRQLIQEAFE QQFNGQDLDY
NQVLEWLGTP EGICATPHSQ RSYAQVKLKV NAEHPLNLSN VINQIEDAVK TPVQSTVKRE
DEQEFARLNA TNLMFCEDAA RRLQAKLESC PEYKDYWVRV NHLESLHPHD AVAIVTKNVP
GGYSDEPNFM ERFQN