Gene Tcr_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1867 
Symbol 
ID3761080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2043988 
End bp2044734 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content49% 
IMG OID637786610 
Productglyceraldehyde 3-phosphate dehydrogenase (phosphorylating) 
Protein accessionYP_392131 
Protein GI78486206 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.274648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGAAG CGACCGGTAA ATTTCGAACG CGTGAGAGTC TGCAAGCTTA TCTGGATCAA 
GGTGTAAAGC AAGTGATTGT GGCGGCGCCG ATGAAGGAAG GCATCAAAAA CATCGTCATG
GGCATTAACG ATAACGTGTT TGACGCCGGC CAAGATCCGA TTATCACGGC GGCTTCGTGT
ACCACCAATT GTATTGCGCC GGTGATTAAG GTCATGCATG AAAAAATCGG TATTCAACAC
GGCATGATTA CCACTATGCA CGATCGTACC AATACCCAGA AAGTGGTCGA CCACGGTCAT
GCTGATTTAC GCCGTGCACG TGCGTCATTT GAATCACTGA TTCCAACCAC GACCGGATCG
GCCAAAGCGA TTGGCACCAT TTTTCCTGAG TTGAATGGGC GTTTGAATGG GTTGGCGGTG
CGTGTGCCGT TTATGAATGC GTCTTTGACG GATTTGGTGT TGGAAATGAA GCGCCCGACG
TCGGTGGAAG AAGTGAATCA ATTTTTAAAA CAAGCCTCTG AAAATGAGCT GGAAGGCATT
CTAGGCTACG AAGAGCGACC TTTGGTGTCC GTCGATTATG AAGGCGAAAC CTGCTCTTCG
GTGATTGATG CGCCTTCAAC GATGGTGGTG AATGGCACTC AAGTGAAATT GCTGGCATGG
TATGACAATG AAATCGGTTA TGTCACGCGT ATGATGGAGT TGGCGGTCAA AGTGGCGTTG
TTAAATCGTC ACGCAGACGC GGAATAA
 
Protein sequence
MIEATGKFRT RESLQAYLDQ GVKQVIVAAP MKEGIKNIVM GINDNVFDAG QDPIITAASC 
TTNCIAPVIK VMHEKIGIQH GMITTMHDRT NTQKVVDHGH ADLRRARASF ESLIPTTTGS
AKAIGTIFPE LNGRLNGLAV RVPFMNASLT DLVLEMKRPT SVEEVNQFLK QASENELEGI
LGYEERPLVS VDYEGETCSS VIDAPSTMVV NGTQVKLLAW YDNEIGYVTR MMELAVKVAL
LNRHADAE