Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1867 |
Symbol | |
ID | 3761080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 2043988 |
End bp | 2044734 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637786610 |
Product | glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) |
Protein accession | YP_392131 |
Protein GI | 78486206 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.274648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTGAAG CGACCGGTAA ATTTCGAACG CGTGAGAGTC TGCAAGCTTA TCTGGATCAA GGTGTAAAGC AAGTGATTGT GGCGGCGCCG ATGAAGGAAG GCATCAAAAA CATCGTCATG GGCATTAACG ATAACGTGTT TGACGCCGGC CAAGATCCGA TTATCACGGC GGCTTCGTGT ACCACCAATT GTATTGCGCC GGTGATTAAG GTCATGCATG AAAAAATCGG TATTCAACAC GGCATGATTA CCACTATGCA CGATCGTACC AATACCCAGA AAGTGGTCGA CCACGGTCAT GCTGATTTAC GCCGTGCACG TGCGTCATTT GAATCACTGA TTCCAACCAC GACCGGATCG GCCAAAGCGA TTGGCACCAT TTTTCCTGAG TTGAATGGGC GTTTGAATGG GTTGGCGGTG CGTGTGCCGT TTATGAATGC GTCTTTGACG GATTTGGTGT TGGAAATGAA GCGCCCGACG TCGGTGGAAG AAGTGAATCA ATTTTTAAAA CAAGCCTCTG AAAATGAGCT GGAAGGCATT CTAGGCTACG AAGAGCGACC TTTGGTGTCC GTCGATTATG AAGGCGAAAC CTGCTCTTCG GTGATTGATG CGCCTTCAAC GATGGTGGTG AATGGCACTC AAGTGAAATT GCTGGCATGG TATGACAATG AAATCGGTTA TGTCACGCGT ATGATGGAGT TGGCGGTCAA AGTGGCGTTG TTAAATCGTC ACGCAGACGC GGAATAA
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Protein sequence | MIEATGKFRT RESLQAYLDQ GVKQVIVAAP MKEGIKNIVM GINDNVFDAG QDPIITAASC TTNCIAPVIK VMHEKIGIQH GMITTMHDRT NTQKVVDHGH ADLRRARASF ESLIPTTTGS AKAIGTIFPE LNGRLNGLAV RVPFMNASLT DLVLEMKRPT SVEEVNQFLK QASENELEGI LGYEERPLVS VDYEGETCSS VIDAPSTMVV NGTQVKLLAW YDNEIGYVTR MMELAVKVAL LNRHADAE
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