Gene Tcr_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1863 
Symbol 
ID3761076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp2039680 
End bp2040678 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content45% 
IMG OID637786606 
Producthypothetical protein 
Protein accessionYP_392127 
Protein GI78486202 
COG category[S] Function unknown 
COG ID[COG1683] Uncharacterized conserved protein
[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00685255 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACAT CAAATCTTGA CCGAATGAAC TTTCCTAAGC TTAAAATTGC GGTTTCCGAT 
TGTCTGAGAG GCACAGAGTG CCGCTACAAC GGTGGCCATG CTCAGGATGA TTTTATCAAT
CATGACCTTG CGCCTTATGC ACAGTTCCTG CCGTTTTGCC CTGAAGCCCC TGTATTGGGA
ACACCGCGCG AAACAATACG CCTCGTCAAC ATTGACGGAA ACATTCGGGT CAGAGGCACC
AAATCTGAAA ATGATGTGAC GGATGGGATT CAAAGCTATA ACCAGAAAAT GATTCCGAAA
TTGCTTGAAC AAGGAGTCGA TGGTGCCATT GTAAAATCAA GATCACCTAC TTGTGGCATG
GAGCGTATAA AGGTTTATCG CCCGACCGGA GAGTGGTTTG GCTCACAAGA TAAAATGGGG
CAAGGGTTGT TTACGGCCGA ATTGCAAAAG CAAGCGCCTC AGTTAGCTGT TGAAGAAGAA
GGGCGATTGC AGGATGCTTG GTTAAGAGAG AATTTTGTGA TGCGTGTTTT TACGGCGGCT
CGATGGCGTG AATTTTTAGC CGCAAATCCG ACCGTGCATG ATTTTCAGGT GTTTCACCGA
GATCACAAAT ATCTGTTTAT GTCGAAATCG GAATCTATTT ATCGTGAAAT GGGGCCGATT
GTGGCGCAAG CCGCTCCAGA TAATTTGGAT GTTCAGTTGG CGCGATATGA AGAAAATCTT
CATGCGCTTT TAGCGTGTCG TTCAACCCGT GGAATGGTGA TTAATGTGCT GGATCATATT
TATGGGTATT TCAAAAAGCA GTTGCTGGAA GATGAGAAGG AACATTATCG TGAAACCCTG
GAAGAGTTTC GAGAAGGTAT TGTGCCTTTG ATTGCCGTGA TAAAAGTATT GCAGCAGTTT
TTGAAACATT ACGGCTCGGA GTATCTCGCA ACACAGGTCT TTTTAAACCC TTATCCGGCT
GATTTGGCGC TTCGATCTAA CGTTACAGCG TACCGTTAA
 
Protein sequence
MPTSNLDRMN FPKLKIAVSD CLRGTECRYN GGHAQDDFIN HDLAPYAQFL PFCPEAPVLG 
TPRETIRLVN IDGNIRVRGT KSENDVTDGI QSYNQKMIPK LLEQGVDGAI VKSRSPTCGM
ERIKVYRPTG EWFGSQDKMG QGLFTAELQK QAPQLAVEEE GRLQDAWLRE NFVMRVFTAA
RWREFLAANP TVHDFQVFHR DHKYLFMSKS ESIYREMGPI VAQAAPDNLD VQLARYEENL
HALLACRSTR GMVINVLDHI YGYFKKQLLE DEKEHYRETL EEFREGIVPL IAVIKVLQQF
LKHYGSEYLA TQVFLNPYPA DLALRSNVTA YR