| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1861 |
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| Symbol | |
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| ID | 3761073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2036706 |
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| End bp | 2037938 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637786603 |
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| Product | efflux family outer membrane protein |
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| Protein accession | YP_392125 |
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| Protein GI | 78486200 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA AAATTTACTT ATACCTTGCC ATTGGGTGGG GTGGATACCT GTTTTCAACT
TCTGCTGTTT ATGCAGTTGA AGATAGTTTG AGCTGGAAAG CTTGGCTTTT TAAACAGGTA
GAGAACCATC CGGAGATAAT CTCAGCTAAA GAGAATATGA ATTCGACGTT TTCATTAGCT
GATGGTCAAT CCAAGCCAAT ATATAACCCT GAATTAGAAA CAGAGTTGGA AAAAGAAGGT
TCCTTCAATA ATTATAATAT TGGCGTTACA CAGACTATTG ACTGGTGGGG AAAACAAGAA
AATCGAAATA GTAGCACTGA CTCTATTAGA GCAATTGCCC GCTACACGTA TGAAGAGATC
TACCTAGAAA AACTCAAGAA CGCTTTAAGT TCAATAGTAA GTTGGCATGC TGCAAAAGCT
CGGTTTGAAT TAGCTCAAAA TCAACAGTCG CAGTTTGATG CCTTAATTCA ATTGGTAAAA
AAACGTCAGC GTTCTGGCGA TTTGGGGCAA ATTGATGTTG AAATGACTCT TCTTTCACTT
TCCCAAAAAT TAAATGAAAC AGCAACGTTA TTGGCTGAAT ATAAATCTTC TGAAGCAAAT
CTACGTGTAT TACTTCCTAG TTGGGATGAA AAAGAATTAC TTTTTCCAAG AACATTCTTT
GATGTTGAGC TAGAACAGCT TGATCAAGAA TCCTTATCTA CACACCCTTC TGTGCTAAAA
GCCATGTCAA CGTGGCGTAT CAGGAAGTTT GAAGCAGAAA TGGCAGCTTT AAACACAAAA
TCTGATCCGA CTTTTGGCGT GAGTATTGGC GAGTCTACGA ATGAAAGCAA AATTGGTTTG
AGCTTATCTA TTCCTTTAAA TATTAGAAAT AATTATAAAG CTGAATCACT TGCGGCAAAA
CAGAAGGTAT TGTCAGCAAA ATCAACTTAT GACGCAGTTA AAAGTAAATT ATTTTATCAG
ATAGTATCTG CCGGTAGTGT TGTTCAACAC TATAAGGTTC AAGTTGCTAA ATGGGACTCC
CTTATGACTG AGAGCAAGGA GCAAAGCCAA GAGCTGTTGG AAAGGCAATG GCGTGCTGGA
GATATTAGTA CTAATGTTTA TTTAATGGCT CTTCAGAGCA GAATGGATGG ATTAATAGCC
GGTATTGATC TTAAGGAACA ATATCAACTG TATGTACTTG ATTGGTTATA TAAGACTGGG
CGCATTAAGA GTTACTTAGC AAATATCAGT TAA
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| Protein sequence | MKFKIYLYLA IGWGGYLFST SAVYAVEDSL SWKAWLFKQV ENHPEIISAK ENMNSTFSLA
DGQSKPIYNP ELETELEKEG SFNNYNIGVT QTIDWWGKQE NRNSSTDSIR AIARYTYEEI
YLEKLKNALS SIVSWHAAKA RFELAQNQQS QFDALIQLVK KRQRSGDLGQ IDVEMTLLSL
SQKLNETATL LAEYKSSEAN LRVLLPSWDE KELLFPRTFF DVELEQLDQE SLSTHPSVLK
AMSTWRIRKF EAEMAALNTK SDPTFGVSIG ESTNESKIGL SLSIPLNIRN NYKAESLAAK
QKVLSAKSTY DAVKSKLFYQ IVSAGSVVQH YKVQVAKWDS LMTESKEQSQ ELLERQWRAG
DISTNVYLMA LQSRMDGLIA GIDLKEQYQL YVLDWLYKTG RIKSYLANIS
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