| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1851 |
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| Symbol | |
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| ID | 3761064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 2026562 |
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| End bp | 2028424 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637786595 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_392117 |
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| Protein GI | 78486192 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACATT TTACTCAGTT TTTTAATCAG CGCCTTTTCA TTCTTAGCGC TCTTTTTATC
TTAATGGCTC TCCCGGTTAT TTATTTTTTA TATCAATGGC AAATTGAAAC GGCACGTAAT
CAAGAGTTCC AGTTTTACAG ATCCAATCTG ACTGAAAAAG TGGATGTGCT GATTCAAGAA
AAGCAAAGCA CCACTCATGC GTTAGTGGTG GCTATGACGT CGCCTCCGGA TTTTAAGCAG
GCATTATTGA AAAATGATAG TTCTATTCAA CAGGAGTTAG AACATTATAG TGAACGGCTG
AAGACGTTGA CAAAATACAA AGGTGTCTGG ATTCAATTGA TTGATGCGAA CGGGATCAGT
ATTGCACGAA GTTGGACAAA AAAACATGGT GATGATTTGA GTAAAGTTCG ACAAGATGTG
GCCGCGCTCA TTCAAGACCC ACGCCGAATG AATAATTTCA GTGTCGGAAA ATTTGCTTTG
ACGTTTAAAT CAATGGTGCC TTTATTTGAC GATAACAATA AATTTATCGG ACTGGTGGAT
GTTATTTCTC AAGTCAATTC CATCGACAAA GCCTTGGCAG AAACCAACGG GGTGCATTCG
GTCGTGTTGG TGAGTAAACG ATATCGAAAA CAATTGATCA ATGCGTTTAC GGGTAAATTC
ATTGATGATT ATTACGTGGC CAATAGTGAT GCCGATACCC GTGATATGGC GTTAATTAAA
AAGATTGGCG TAGACAAAGT TTTTTCAAGT TCCAATTATG TTTTGTTTGA AAATCAATTG
ATGGTGACAC GCCCGATTTA CGATATTCAT GGTCAGCCCA TGGCAACCTG GGTGACGCTC
AAGCCCTTAG AGGACTTTTC TTTTGTAAAT GTGCAAAAAA CGCAACGTCA GTTCATTGTT
ATTACGGTGT TTATCTTTGC CTTATTGTTG ATGTTGTTGG CGATGATGTA CTTTAAGCGT
CAGGCAGAGT TTGAAAAACG TTTCTTTTTT GAAGTGTTCG ATACCTCGAC CGAAATTGTG
TATGTATCCA ATCAGCGCCG AATTTTGTTT GCCAATAAAC GCTTTTTTGA GTTTTTTAAT
GAGTTCGAAA CTCTGGAGGA CTTTCATGAA AAGTACCACT GTATTTGCGA ACTGTTTATG
CCGGAAGAAG GTTTTTTAAG GCGTCATATT AATGGTGTCT ATTGGTTTAA TCATGTGATT
CAAAATAAGC ATGAACCACA TTATGCAAAA GTGCAACTGA ATGGAAAAGA ATATATTTTC
TTGGTGAAAG CGACGGAGAT CTCCAACGCG TATGGTGATC AATATGTGAG TGTGTTGATG
ACGGATATTA CCGAGGAAGA GCATTATAAG TCTCAGTTAG AGCATTTGAT TATTCATGAT
GAATTGACGG GTGTTTATAA CAGGCACTAC TTTAACCGCA CGCTTGAACA GGAAATTAAA
CGCCATCAGC GTTATCAATC GCCGTTTTCA ATGGCGTTTA TGGACATTGA TCACTTTAAG
ATGATTAATG ATACTTATGG TCACGATGTG GGTGATGCGG TGTTGGTGAG TCTGGCAAAA
AATATCAGTT CATTGCTCCG GAGTACCGAC GTTTTCTGTC GTGTCGGAGG CGAAGAGTTT
GTGATTATGA TGCCTGAAAC CAGCCTGGAA AATGCGTTAA TTATTTCCGA GCGTATTCGT
TCGACGGTAG AAGGCATTTC AAGTAAAGAC GTTCCAGAAA AAATCACCAT CAGTATGGGC
TTGGTTGAAC TGAATTCCTG GGATAACGTT CAGAGTTTTT ATAAACGTGC TGATGAAGCG
TTGTATAAAG CAAAAGAAAA TGGTCGAAAC CGTATTGAAA CACAAGTAGA AGACCGAACG
TAA
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| Protein sequence | MPHFTQFFNQ RLFILSALFI LMALPVIYFL YQWQIETARN QEFQFYRSNL TEKVDVLIQE
KQSTTHALVV AMTSPPDFKQ ALLKNDSSIQ QELEHYSERL KTLTKYKGVW IQLIDANGIS
IARSWTKKHG DDLSKVRQDV AALIQDPRRM NNFSVGKFAL TFKSMVPLFD DNNKFIGLVD
VISQVNSIDK ALAETNGVHS VVLVSKRYRK QLINAFTGKF IDDYYVANSD ADTRDMALIK
KIGVDKVFSS SNYVLFENQL MVTRPIYDIH GQPMATWVTL KPLEDFSFVN VQKTQRQFIV
ITVFIFALLL MLLAMMYFKR QAEFEKRFFF EVFDTSTEIV YVSNQRRILF ANKRFFEFFN
EFETLEDFHE KYHCICELFM PEEGFLRRHI NGVYWFNHVI QNKHEPHYAK VQLNGKEYIF
LVKATEISNA YGDQYVSVLM TDITEEEHYK SQLEHLIIHD ELTGVYNRHY FNRTLEQEIK
RHQRYQSPFS MAFMDIDHFK MINDTYGHDV GDAVLVSLAK NISSLLRSTD VFCRVGGEEF
VIMMPETSLE NALIISERIR STVEGISSKD VPEKITISMG LVELNSWDNV QSFYKRADEA
LYKAKENGRN RIETQVEDRT
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