| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1847 |
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| Symbol | |
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| ID | 3761060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 2022162 |
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| End bp | 2023418 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786591 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_392113 |
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| Protein GI | 78486188 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGA GCCAACCCTT CCACTACCAA AACAACATTC TTCATGCTGA AGGCTGTCCT
TTAGATACGT TGGCTCAAAA ATACGGCACG CCATTGTACG TGTATTCACG CCAGGCATTT
GAAGATCGCT GGCGTGAATT TGACCAAGCC TTTGGCCGTC AACCGCATTT AGTGTGTTAT
GCGGTCAAAA CCAATTCCAA TATTGCAATT TTGAACCTAT TAGCGCGTTT AGGGTCAGGG
TTTGACATCG TGTCTCAAGG AGAGCTTGAG CGCGTCTTGC GTGCGGGTGG CGATCCATCA
AAAGTGGTTT TTTCAGGCGT TGCTAAAAAG TCTTCAGAAA TTGAACGTGC ACTCACGGTT
GGCATTCGCT GCTTTAATGT AGAATCTCAT GCCGAGTTAG ATCGCATCCA AGCGGTTGCC
AAAAAACTGA ATAAAATCGC CCCTATTTCC ATCCGAGTCA ATCCTGATGT GGACGCCAAA
ACCCACCCTT ACATTTCGAC TGGCCTGAAA GATAACAAGT TTGGGGTCGA TATTAACACC
GCTCCAGCGT TATATGCCGA TGCTCAAGCA CTCTCGCATA TCGACATTAT CGGAATTGAT
TGCCACATCG GTTCGCAACT GACCGAAATC ACCCCATTCG TCGATGCTCT TGACCGAGTT
TTAGAGCTTA AAAAGACGTT AACCGATCAA GGCATTAACA TCCACCACTT GGACTTGGGA
GGCGGTTTAG GCATTCAATA CACTGATGAA ACGCCACCGG AAATTGCCGA CTACATTCAA
GCCTTAATGA AAAAGCTGGA TGACCCGTCG ATTGAAGTGA TTATTGAACC TGGGCGTGCC
ATTGCTGGGA ATGCGGGAGT TTTAGTGACT GAAGTTGAAT ATCTGAAACC GACAGAGCAC
AAGAATTTCG CCATCATTGA TGCCGCAATG AACGACTTGA TCCGTCCTGC GCTCTATCAA
TCACATCAAA CCATTCAACC GGTTACACCG CGAACGGATG GTGAAGACGT GGAATGGGAT
TTAGTCGGTC CGGTTTGCGA AACAGGCGAT TTTTTAGGGA AGCAACGTAA GCTGAACTTA
AAAGCTGGCG ATTATCTGGC CGTCATGTCA TCAGGGGCTT ATGGTTTTAC TATGAGTTCC
AACTACAATA CACGGACACG TGCGGCAGAA ATCCTGGTTG ACCATAAGCA AGCTTATGAA
ATTCGCCCTC GAGAAACCTA TAATGATTTG ATGGGCAAGG AAAAACTCAT TCCTTAA
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| Protein sequence | MSQSQPFHYQ NNILHAEGCP LDTLAQKYGT PLYVYSRQAF EDRWREFDQA FGRQPHLVCY
AVKTNSNIAI LNLLARLGSG FDIVSQGELE RVLRAGGDPS KVVFSGVAKK SSEIERALTV
GIRCFNVESH AELDRIQAVA KKLNKIAPIS IRVNPDVDAK THPYISTGLK DNKFGVDINT
APALYADAQA LSHIDIIGID CHIGSQLTEI TPFVDALDRV LELKKTLTDQ GINIHHLDLG
GGLGIQYTDE TPPEIADYIQ ALMKKLDDPS IEVIIEPGRA IAGNAGVLVT EVEYLKPTEH
KNFAIIDAAM NDLIRPALYQ SHQTIQPVTP RTDGEDVEWD LVGPVCETGD FLGKQRKLNL
KAGDYLAVMS SGAYGFTMSS NYNTRTRAAE ILVDHKQAYE IRPRETYNDL MGKEKLIP
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