| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1839 |
|---|
| Symbol | metX |
|---|
| ID | 3761052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 2013967 |
|---|
| End bp | 2015124 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637786583 |
|---|
| Product | homoserine O-acetyltransferase |
|---|
| Protein accession | YP_392105 |
|---|
| Protein GI | 78486180 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2021] Homoserine acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01392] homoserine O-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0107828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATG AAATTGGTAT AGTAACCCCT CAAAAACTCC ATGTTTCGAC CCCTCTTGAG
ATGGTCAGTG GCTCCACTTT GCCTGAATAT GACCTGGCCT ACGAAACCTA CGGCAGCCTA
AATGCCGATA AAAGTAATGC CATTTTAATT TGCCATGCAT TAAGTGGAAA CCATCATGTG
GCCGGTCAAT ATGAAGGGGA ATCAACCAGA GGTTGGTGGG ATGGCTATAT TGGTCCAGGG
AAACCGATCG ATACCAATCG TTTTTTTGTG GTCTGCTCCA ATAATCTAGG CGGTTGCCAT
GGTTCAACAG GTCCTGCCAG TATCAACCCC CTAACCGGAA AAGTGTACGG ACCTGACTTT
CCGATTGTGA CCTGTAAAGA TTGGGTACAC AGCCAAAACA CGCTGCGTCA ACATTTAGAA
ATCGATGCCT GGGCGGCCGT CATTGGGGGA TCAATGGGCG GCATGCAAGT TTTACAATGG
ACCATCGACT TTCCCGATCA AATTCGTCAT GCCATTGTGA TTGCCTCTGC ACCTAAATTA
TCGGCACAAA ACATTGCATT CAACGAGGTC GCACGTCGTG CCATTATGAC CGACCCCGAC
TTTCATGACG GTCGCTTTAT CGAAGCCGGC ACCACGCCGA AAAGAGGATT GGCTTTAGCT
CGAATGCTAG GACATCTAAC CTATTTATCC GATGATATGA TGGGTTCAAA ATTCGGTCGT
GAACTGCGAG AGGGCAAACT TAATTATAAC TTTGATGTGG AATTTCAGGT TGAGAGCTAC
CTTCGCTACC AGGGTGAAAA GTTTGCAACA AAACAAAACT TTGACGCGAA CACCTATTTA
CTAATGACCA AAGCGTTGGA TTATTTTGAC CCTGCCGCCG ACTTTGATGA TGATCTATCC
AAAGCCCTTT CTGGCGCAAC GGCAAAATTT TTGATCATTT CATTTACCAC TGATTGGCGT
TTCTCCCCTG AGCGATCACA TGAAATCGTT AAGGCCTTAC TCGATAACGA TGCCGACATC
AGTTATGCCG AAGTGAATTC ACAGCATGGA CATGATGCCT TTTTATTGCC GAATGACCAT
TATGAAGGTG TTTTTCGTGC CTATATGAAA CGAATTCATG CCGAATTAAA CCACACCTCT
TTGCAGGAAG GAGAATAG
|
|---|
| Protein sequence | MTDEIGIVTP QKLHVSTPLE MVSGSTLPEY DLAYETYGSL NADKSNAILI CHALSGNHHV
AGQYEGESTR GWWDGYIGPG KPIDTNRFFV VCSNNLGGCH GSTGPASINP LTGKVYGPDF
PIVTCKDWVH SQNTLRQHLE IDAWAAVIGG SMGGMQVLQW TIDFPDQIRH AIVIASAPKL
SAQNIAFNEV ARRAIMTDPD FHDGRFIEAG TTPKRGLALA RMLGHLTYLS DDMMGSKFGR
ELREGKLNYN FDVEFQVESY LRYQGEKFAT KQNFDANTYL LMTKALDYFD PAADFDDDLS
KALSGATAKF LIISFTTDWR FSPERSHEIV KALLDNDADI SYAEVNSQHG HDAFLLPNDH
YEGVFRAYMK RIHAELNHTS LQEGE
|
|---|
| |