Gene Tcr_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1838 
Symbol 
ID3761051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp2013296 
End bp2013865 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content44% 
IMG OID637786582 
Producthypothetical protein 
Protein accessionYP_392104 
Protein GI78486179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000231673 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAG TCGGTCAAGG CGGTTTGTTT TTAATTCAAT TTTTAGCAGG CCTAGTTATT 
TTTACCCTAC TGTTACGTTT CTTCATGCGT GCGACCTATG TTGATTGGCG CCACCCCATT 
GTGAACTTTA TTGCCAAAGT CACCAATCCA CTTTGTGCAC CACTCAACAT GGTCCTACCA 
AAGCCAAATC GCTGGGATTG GAGTGCGATT TTGACCGCCA TGCTGGTGCA GGCCCTCTTA 
GTGATCTTAA TCGGATTTTT AACAGACCGA AGTTTTGGCG TCGGATTAAT TGTTATTTCC 
TCGGTCACCG AGATTATGAA CCAACTCTTA GACATGATGT TCTGGCTGAT CATCATTCAA 
GTGATTTTAA GCTGGGTGTC ACAAGGCTAT AACCCGAACA CGGCTATTTT CGACCAAATG 
GCACAACCGA TTTTAAGTCC TTTTCAAAGA CTGATTCCAC CGATGGGCGG ACTCGATTTA 
TCCCCTATTG TGGCCATCAT TGCCATCAAA TTGACACAGA TTGTCATTGT GGGATCCATT 
GCTCAACTGG GTCAAAATAT GTTGCTTTAG
 
Protein sequence
MTPVGQGGLF LIQFLAGLVI FTLLLRFFMR ATYVDWRHPI VNFIAKVTNP LCAPLNMVLP 
KPNRWDWSAI LTAMLVQALL VILIGFLTDR SFGVGLIVIS SVTEIMNQLL DMMFWLIIIQ 
VILSWVSQGY NPNTAIFDQM AQPILSPFQR LIPPMGGLDL SPIVAIIAIK LTQIVIVGSI 
AQLGQNMLL