Gene Tcr_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1827 
Symbol 
ID3761040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp2003753 
End bp2004319 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID637786571 
Producthypothetical protein 
Protein accessionYP_392093 
Protein GI78486168 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACATT TAAACTCTTT GGAACACCAC TTTCTTATCG CCATGCCCAA TTTAACGGAG 
AGCTGGTTTG ATAAAACCGT GATTTACATT GTCGAAGACA ATGAACATGG CACGATGGGA 
TTGGTCATTA ATTTAGAACA TAATTTAACC GTTCCAGAAT TACTCGACCA TTTTGAACTG 
ACGGTGGAAG CACCGGAAAA CTATGCCGAC CAGCCAGTTT TGATGGGAGG GCCGGTTGAT 
TTAGAACATG GGTTTATTTT GCATGAACCC CAAGGCACTT GGCAAAAAAG TCTTCCTTTA 
CGTGACAACC TCGCCATGAC GGTTTCCGAA GATTTCTTAA AAGCCATGGC AGACGGCACC 
GCCCCCGAAA AAATAGTGGT GTGCCTCGGA TTTTCAGGCT GGGAAAAAGG ACAACTCAAT 
GACGAAATTC AAGCCAACAA TTGGCTGACG ATTCCTTATA ATGAGGCTCT ATTGTTCGAT 
GTTCCTAACG ATCAAAAATG GCAAGTGGCT TTAAACACAC TCGGTATTTC TCCTGAATCA 
CTGAGCATGG ACGCCGGCCA TGACTAA
 
Protein sequence
MEHLNSLEHH FLIAMPNLTE SWFDKTVIYI VEDNEHGTMG LVINLEHNLT VPELLDHFEL 
TVEAPENYAD QPVLMGGPVD LEHGFILHEP QGTWQKSLPL RDNLAMTVSE DFLKAMADGT 
APEKIVVCLG FSGWEKGQLN DEIQANNWLT IPYNEALLFD VPNDQKWQVA LNTLGISPES 
LSMDAGHD