Gene Tcr_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1819 
Symbol 
ID3761391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1994529 
End bp1995044 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content52% 
IMG OID637786563 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_392085 
Protein GI78486160 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACCG CAAAAACAGG AAGTAACATC CCGTTGGTGG GTGTGATTAT GGGGTCCAAG 
TCAGATTGGC CAACCATGGA AAAGGCCGTT GAAATGCTTG AAGAATTCGG CGTAGCGCAT
GAAGTGAAAG TCGTGTCGGC TCACCGTACA CCCGACTTGA TGTTTGAATA TGCGGCCGAA
GCGGAAGCGC GTGGGCTGCA AGTCATCATT GCGGGTGCTG GGGGTGCGGC GCATTTACCC
GGTATGGTTG CCGCTAAAAC GATCGTGCCT GTTTTAGGTG TGCCGGTACA ATCCCGTGCA
CTAAGTGGTC AGGACTCTTT GTTATCGATT GTGCAAATGC CGGGTGGCAT TCCGGTCGGA
ACACTTGCAA TTGGTGAAGC TGGTGCCAAG AATGCCGGTA TTATGGCGGC GCAAATCGTG
GGCAATCAAA ATGCTACCGT GCGTGAGAAA GTAAGAGCGT TTCGCGAGGC TCAAACACAG
TTCGTTTTAG AGAATCCAGA TCCAACCATC CCTTAA
 
Protein sequence
MSTAKTGSNI PLVGVIMGSK SDWPTMEKAV EMLEEFGVAH EVKVVSAHRT PDLMFEYAAE 
AEARGLQVII AGAGGAAHLP GMVAAKTIVP VLGVPVQSRA LSGQDSLLSI VQMPGGIPVG
TLAIGEAGAK NAGIMAAQIV GNQNATVREK VRAFREAQTQ FVLENPDPTI P