| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1810 |
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| Symbol | |
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| ID | 3761382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1986429 |
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| End bp | 1987505 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637786554 |
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| Product | glycoprotease family metalloendopeptidase |
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| Protein accession | YP_392076 |
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| Protein GI | 78486151 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000788208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACAA CTCATTCGAA TCCGTCATCT CCTTCCTTAA CGCTTGGCAT TGAAACGTCT
TGTGATGAAA CTGGAATAGC ATTATACCAT TCTGAAAAAG GATTAATTGC ACACACGCTT
TACAGCCAGA TAAAACTTCA TGCGGAGTAT GGTGGCGTGG TGCCGGAACT GGCTTCTCGT
GACCACATTC GAAAGATTAC CCCGTTGATT CAGGAAACCT TGAAAAAGGG GCAGGTCAGC
GCGAAAGACA TTACCGGCAT TGCCTATACG GCGGGACCGG GTTTAATGGG CGCCCTGCTT
TCGGGCGCAT CGGTGGCTCG CAGCCTGGCT TTTGCCTGGC AAATTCCGGC CATTGCCATT
CATCATATGG AAGGCCATTT ACTGGCACCG ATGTTGGAAG AAACCCAGCC GGAATTTCCA
TTTGTCTGTC TGTTGGTGTC TGGCGGTCAC ACGATGATTA TTCGAGTGGA CGGCATTGGA
CGTTATAAAT TACTCGGCGA CACCTTAGAT GATGCCGCGG GTGAAGCGTT TGATAAAACC
GCTAAAATGC TGGGATTAGG CTATCCGGGT GGTCCTGAAG TCTCTAAGCT GGCGTTGCAT
GGTCAAACCG ATCGTTATAA ATTTCCACGC CCGATGGTGG ATCGCCCTGG CTTGGACATG
AGTTTCAGTG GTTTGAAAAC CTTTACCCTC AACACGTGGT TAAAAGCAAA AGAAAGCGGC
GATGATTCTG AACAAACCAA AGCCGACATT TGCCGTGCGT TTGAAGTGGC GGTGGCCGAT
ACCTTGAGTA TTAAATGCAA GCGCGCTTTA GAACAGGAAG GACTGAATCG TTTGGTGGTG
TCCGGCGGCG TCAGTGCGAA TCGTGAAATT CGAGCGAAGC TGGATGCGTT AATGGCGAAA
CGAAAAGGCA GTGCTTTTTA CCCAAGGCTT GAATTCTGTA CCGACAACGG GGCGATGATT
GCATATGCCG GGTCCAAACG ACTAGAAGCC GGGCAATTTT CTGATTTAAA TTTTGCCTGC
CAACCTCGCT GGGATTTGGA ATCGTTGGAG CCGATAGACC CCATTGAAGT GGTTTAA
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| Protein sequence | MQTTHSNPSS PSLTLGIETS CDETGIALYH SEKGLIAHTL YSQIKLHAEY GGVVPELASR
DHIRKITPLI QETLKKGQVS AKDITGIAYT AGPGLMGALL SGASVARSLA FAWQIPAIAI
HHMEGHLLAP MLEETQPEFP FVCLLVSGGH TMIIRVDGIG RYKLLGDTLD DAAGEAFDKT
AKMLGLGYPG GPEVSKLALH GQTDRYKFPR PMVDRPGLDM SFSGLKTFTL NTWLKAKESG
DDSEQTKADI CRAFEVAVAD TLSIKCKRAL EQEGLNRLVV SGGVSANREI RAKLDALMAK
RKGSAFYPRL EFCTDNGAMI AYAGSKRLEA GQFSDLNFAC QPRWDLESLE PIDPIEVV
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