Gene Tcr_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1808 
Symbol 
ID3761380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1985553 
End bp1986005 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content43% 
IMG OID637786552 
Producthypothetical protein 
Protein accessionYP_392074 
Protein GI78486149 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000171328 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGTG AATTAAAAGC CCGTCTGACT TCAGAAATGA AGGTTGCCAT GAAGGCAAAA 
GAGAAAGAGC GCCTAGCGGT AATCCGTTCA ATGCAGGCTG CAATCAAGCA AGTGGAAATT
GATAATCAGA CCACGCTTGA AGATGACGCG GAAGTGTTGC CAATTTTAGA TAAAATGTTG
AAGCAACGCC GCGACTCTTT TCAGCAATAT GAAGAAGCAG GCCGACCAGA ACTGGCTGAG
CAAGAAGCAT TTGAAATGAA CATTATTCAA GACTTCTTGC CAAAACCACT AACAGAAGCA
GAAGTTTCGC AATTAGTGGA TGAAGCGATT TCAGACGTTT CAGCATCCTC CATGCAGGAT
ATGGGGAAAG TCATGGGGCT GTTAAAGCCA AAGATGCAAG GTCGTGCCGA TATGGCAGAA
GTCAGTAAAC TGATTAAGGC AAAATTAAGC TAA
 
Protein sequence
MSSELKARLT SEMKVAMKAK EKERLAVIRS MQAAIKQVEI DNQTTLEDDA EVLPILDKML 
KQRRDSFQQY EEAGRPELAE QEAFEMNIIQ DFLPKPLTEA EVSQLVDEAI SDVSASSMQD
MGKVMGLLKP KMQGRADMAE VSKLIKAKLS