| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1792 |
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| Symbol | |
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| ID | 3761833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1961945 |
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| End bp | 1965565 |
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| Gene Length | 3621 bp |
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| Protein Length | 1206 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637786535 |
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| Product | allophanate hydrolase subunit 2 |
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| Protein accession | YP_392058 |
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| Protein GI | 78486133 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.73882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA AAATTCTCAT TGCCAACCGT GGAGCGATCG CAACCCGAAT CATCCGTACT
TTGAAACAAA TGAACATTCA GTCTGTGGTG TTGGCGTCCG ATGCTGATCG CGCCTCACTG
CATGTTCAGC AAGCAGATGA AGTCATTTTC TTGAAAGGCA ATGTGGCAAC CGAAACTTAT
TTAAACGTGC CGGTTATCCT GGAAAAAGCT CAAGAACTTG GCGTGGAAGC CATTCACCCT
GGATACGGTT TTTTAAGTGA AAACGATGGG TTTGCCGAAA CCTGCGAAAG CATGGGCATT
AAGTTCATTG GACCAGCACC CGACCATATT CGGGATTTTG GACTCAAACA CACTGCACGA
GAACTTGCCA TTAAAGCCAA TGTTCCCTTA CTGCCCGGTT CAGATTTACT CTCCTCTCTC
GACGTTGCAC AACAAGAAGC TGACCGCATC GGTTTCCCGG TGATGTTAAA AAGCACGGCC
GGTGGTGGAG GTATTGGGAT GCAGCGCTGT GATACGCCGG ACAATCTTTC GGAAGCGTTT
GAGCAAGTGG CTCGCCTCAG TCAAAACTCC TTTGGCCAAA GCGGCATTTT TCTAGAAAAA
TTCGTCGTCA ATGCACGCCA TATTGAAATT CAAATTTTTG GGGACGGACT TGGCAAAGTG
GTTTCCTTTG GTGAACGTGA CTGCTCACTA CAGCGCCGAA ACCAAAAAGT GGTGGAAGAA
ACGCCCGCTG TCGGTATTAG CCGAGAACAA GTGGCTGAAA TGGAAGCCCA TGCCGTTCGA
CTCGGTGAAT TAGTGAATTA CCAATCTGCC GGGACGGTGG AATATGTCTA CGATGCCGAT
ACGAATCAAT ATTACTTTTT AGAAGTCAAT ACGCGCTTAC AGGTAGAACA CGGGATTACC
GAAGCGGTGC GTGATGTGGA TTTGGTTCAA TGGATGATTC AAGTTGCTTA CGATCAAACG
TTTCCGGAAG CGGTCAAGCC TGCGCGAGGT CACGCCATTG AAGTACGTGT CTACGCCGAA
GATCCTTTCA AAAACTTCCA GCCCAGCTCA GGAAAACTGA CCGGTTGGAA AATGCCGACA
GATTGCCGTG TCGACACCTG GTGTACCAGC GGGCAAGACG TAAGCTCTTA TTACGACCCG
ATGCTGGCCA AAATCATTGT CAAAGGGGAT GATCGCGCAA CAGCGGTCAA CAAACTGCAA
ACCGCTTTGG ATGACACCCG CATCGACGGG TTTGAAACCA ACATTATTTA TCTGGCCGCA
CTCAGTCATG CTCCGGCCTT TATCAATGCC GAAAACCTGT ACACTCAATT TTTAAATGGC
TTTAGCCATC AACCGAATAC GGTGGAAATC ACCAATCCGG GCACACATTC CATGTTGGTG
AGTTACCCGG GTCGTTTAGG CTATTGGGAC ATCGGCGTAC CGCCATCCGG TCCAATGGAC
GCCCTATCTC ATCGTTTGGC AAACCGATGC TTGAACAACG ATGAAAATGC CGCGACCATT
GAGATGACCG TTTCCGGTGT CAGTTTAAAG TTTGATCGTG ACACGGTGAT TTGTATCACC
GGGGCGGATA TTAACCCCAC TCTCGACAAA CAGCCGATCC CTCAAAATGA AGCCGTGTCC
GTCAAAGCAG GACAACTGCT GAAGTCAAAA GTCATCAAGT CGTTAGGACA ACGAGCTTAT
TTGGCCATCA AAGGCGGCTT TGATGTACCG GATTATATGG GCAGTAAAAC CACCTTTTCA
TTAGGCGGTT TCGGTGGTCA TGCCGGTCGT TTATTGCGTG CGGGAGACGT GTTGCATTTA
TCCACTGACA CCGATGATAC GCAAGTGAAC CGTTTACCGG CCGAACTGAT GCCAGAATTG
ACTAACTACG CCGAAATCGC GGTAATCTAT GGTCCACAAG GGTGTCCAGA TTTCTTTACC
GAAGATGACA TTGAAACCTT CTTTGCCACC GACTGGGAAG TGCATTACAA CTCCAGCCGT
ACCGGGATTC GATTAAACGG CCCCAAACCA AACTGGGCAA GAACCGATGG TGGCGAAGCC
GGATTGCATC CATCCAATAT TCACGACAAC GCCTATGCAA TTGGGGCGAT TGATTTTACC
GGTGACATGC CGGTTATTCT GGCGCAAGAC GGCCCTAGCT TAGGTGGCTT TGTTTGTCCA
GCCACCATCA TTGAAGCAGA ACAATGGAAA ATGGGGCAAT TGCGCCCAGG GGATAAAATC
CGTTTCAAGC CGGTTTCAAC CGAAACGGCT GAGGCCGCTC TAAAAGCACA AGAAGCCGCT
TTGAAAAGTT TAACGCCAAA AACCTTACCT GCTTTGACGT TCTTAAAAGA ACCGACCGAA
CAATCGTGCC TCGCATTTGA GTTGTCCGAT CAAGAACATG AATTCGGTGT CAAATATCGC
CGCTCTGGTG ACAGTCATGT CTTGATTGAG TACGGCGCAA TGGAATTGGA CTTGGCTTTA
CGATTCCGAA TTCAGGTACT AACAGACAAA CTGAAACAAC TGAGAAATGA CCAGGCCTGG
CCATTTTTAA ACGATTTAAC CCCAGGCATT CGATCTCTGC AAGTGCATTA CGATCCTCGT
AAAATTTCTC AAAAAGAGAT CATTGAGAAA CTGATTGCTT TAGAAGAAGA GATTTCTTCC
GCGCAAGACT TAACTGTGAA AAGCCGCATC GTGAAATTGC CGTTGTCTTG GGATGATCCA
AGCACCAAAT TGGCGATTGA AAAATACATG AACTCGGTTC GACCGGATGC CCCTTGGTGT
CCGAGTAACA TTGAATTCAT TCGTCGCATC AATGGCCTGG ATTCGATTGA GGACGTGAAA
CGCATTGTAT TCGAAGCCAA ATATTTGGTG ATGGGCTTGG GCGATGTGTA CTTGGGGGCT
CCAGTTTCCA CACCGCTTGA CCCTCGTCAT CGTTTGGTTA CCACTAAATA CAATCCGGCA
CGTACCTGGA CACCGGAAAA TGCCGTTGGT ATCGGTGGCG CGTATATGTG TGTCTACGGC
ATGGAAGGCC CGGGGGGCTA CCAGTTTGTA GGGCGGACCA TTCAAATGTG GAATGCTTAC
CGTAATACTG AATTTTTCCC ACCTGGCAAA CCCTGGTTGC TCGACTTCTT TGACCAAATT
CAGTTTTATC CGGTCAGCGA AGAAGAACTG GCGCAAGCGA GACAAGACTT CCCGCTGGGG
CGTTACGACA TCTCAATCGA AGAAACAACC TTATCTCTGA AGGAATACCA AGCCTTTTTG
GCCGAAGAAG CCGACAGCAT TGACGCCTTC CGCACCAAAC AACAAGCGGC GTTCGAAGCC
GAACGCCAAC GCTGGGAAGA AAACGGTCAG GCCAATTATG ATGTGTCTTC AGACCAAGAA
GAAATTGCGA ATGAACCCAT GGCGGAAATT CCAGAAGGCT TTGAAGCGGC ACTCTCTCCC
ATTACTGGAA GTGCATGGAA AATTACCGTT AAACCGGGCG ATAAGGTTGA AGAAGGCGAC
GTGATTGCGA TTTTAGAAAC CATGAAAATA GAAATTCCAG TGGAAGCGGA AACCGATGGC
GTGATCACTG AAATCTTAAT TAACGAAGGC GACCTCATTC AAAACGGGCA AGCCTTGATG
GTTATGGAGG TCACAAACTA A
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| Protein sequence | MFKKILIANR GAIATRIIRT LKQMNIQSVV LASDADRASL HVQQADEVIF LKGNVATETY
LNVPVILEKA QELGVEAIHP GYGFLSENDG FAETCESMGI KFIGPAPDHI RDFGLKHTAR
ELAIKANVPL LPGSDLLSSL DVAQQEADRI GFPVMLKSTA GGGGIGMQRC DTPDNLSEAF
EQVARLSQNS FGQSGIFLEK FVVNARHIEI QIFGDGLGKV VSFGERDCSL QRRNQKVVEE
TPAVGISREQ VAEMEAHAVR LGELVNYQSA GTVEYVYDAD TNQYYFLEVN TRLQVEHGIT
EAVRDVDLVQ WMIQVAYDQT FPEAVKPARG HAIEVRVYAE DPFKNFQPSS GKLTGWKMPT
DCRVDTWCTS GQDVSSYYDP MLAKIIVKGD DRATAVNKLQ TALDDTRIDG FETNIIYLAA
LSHAPAFINA ENLYTQFLNG FSHQPNTVEI TNPGTHSMLV SYPGRLGYWD IGVPPSGPMD
ALSHRLANRC LNNDENAATI EMTVSGVSLK FDRDTVICIT GADINPTLDK QPIPQNEAVS
VKAGQLLKSK VIKSLGQRAY LAIKGGFDVP DYMGSKTTFS LGGFGGHAGR LLRAGDVLHL
STDTDDTQVN RLPAELMPEL TNYAEIAVIY GPQGCPDFFT EDDIETFFAT DWEVHYNSSR
TGIRLNGPKP NWARTDGGEA GLHPSNIHDN AYAIGAIDFT GDMPVILAQD GPSLGGFVCP
ATIIEAEQWK MGQLRPGDKI RFKPVSTETA EAALKAQEAA LKSLTPKTLP ALTFLKEPTE
QSCLAFELSD QEHEFGVKYR RSGDSHVLIE YGAMELDLAL RFRIQVLTDK LKQLRNDQAW
PFLNDLTPGI RSLQVHYDPR KISQKEIIEK LIALEEEISS AQDLTVKSRI VKLPLSWDDP
STKLAIEKYM NSVRPDAPWC PSNIEFIRRI NGLDSIEDVK RIVFEAKYLV MGLGDVYLGA
PVSTPLDPRH RLVTTKYNPA RTWTPENAVG IGGAYMCVYG MEGPGGYQFV GRTIQMWNAY
RNTEFFPPGK PWLLDFFDQI QFYPVSEEEL AQARQDFPLG RYDISIEETT LSLKEYQAFL
AEEADSIDAF RTKQQAAFEA ERQRWEENGQ ANYDVSSDQE EIANEPMAEI PEGFEAALSP
ITGSAWKITV KPGDKVEEGD VIAILETMKI EIPVEAETDG VITEILINEG DLIQNGQALM
VMEVTN
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