Gene Tcr_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1791 
Symbol 
ID3761832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1961251 
End bp1961895 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID637786534 
Producthypothetical protein 
Protein accessionYP_392057 
Protein GI78486132 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03424] urea carboxylase-associated protein 1 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATG CTAATGTTGA TGCCAGCCGA ATTGTTTACC GTGAAGTTGT CGAAGCCGGC 
GATCCTTGGA TGCATGAAGT CAAAGCCGGA CAACGCTTTC GCATCGTCGA CCTTGAAGGA 
AACCAAGCGG TAGATACCCT GTTTTACAAT GCTCACGATC ATTCGGAGCG TTATTCCGCA 
ACGGATACGA TTCGGGAACA AGGCAATATT TATTTAACCA AGGGGTCTGT GCTTAAATCG 
AATTTACTGA ACCCGATGCT GACAATTGTG GATGACACCT GTGGCCGACA CGATACCATT 
GGCGGCGCTT GCTCTGCCGA AAGTAACACC GTGCGTTATG CCATCGAAAA ACGACACATG 
CACTCTTGTC GCGATTCTTT CTTAACCGCA CTCGGGCAAT GTGAATGCAA TGCCAACAAA 
CCCATGACCA AGGGCGATTT ATCCAGCAAC ATCAACTTCT TCATGAATGT GCCTGTTTCA 
CCGGACGGTC ATTTAGATTT TGATGACGGC ATCTCAGCGC CTGGGCGCTA TGTGGAAATG 
GAAGCACACA TGGACACTTT AATTTTGGTT TCCAATTGCC CGCAACTGAA TAACCCGTGT 
AACGGATACA ACCCGACGCC TGTCGAAATG ATTATCTGGA AATAG
 
Protein sequence
MTNANVDASR IVYREVVEAG DPWMHEVKAG QRFRIVDLEG NQAVDTLFYN AHDHSERYSA 
TDTIREQGNI YLTKGSVLKS NLLNPMLTIV DDTCGRHDTI GGACSAESNT VRYAIEKRHM 
HSCRDSFLTA LGQCECNANK PMTKGDLSSN INFFMNVPVS PDGHLDFDDG ISAPGRYVEM 
EAHMDTLILV SNCPQLNNPC NGYNPTPVEM IIWK