Gene Tcr_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1790 
Symbol 
ID3761831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1960491 
End bp1961264 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content46% 
IMG OID637786533 
Producthypothetical protein 
Protein accessionYP_392056 
Protein GI78486131 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03425] urea carboxylase-associated protein 2 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA ACACTTCTAA CCCCTCTCAA AAAATGACCA GGCCTGGTGG GTTTATCTGG 
CAAGAACATT TGCCAGGTGG TGCGCATTGG TCTGGCGTCA TTCGTCGCGG CACGGTGCTT
CGTTTAACCG ATCTTGAGGG CAACGCCAAC GTATCGATGT TAATCAACAA CATCGAAATC
AAAAATGAAC GCTATAACAT GCCCGACACT TTGAAAGCGC AAAAAACCGC GTTTTTGACA
AAACCCAACA TGTGCTTCAC AGATATGGGC CGTGTCATCT GCTCAATCAT TGAAGACACC
TGCGGCTGGC ATGACACCAT TGGAGGCTTG TCTCACGCTA AGCTGGTTCA TCAAAAATAT
GGCGACAAAA GTTACCAAAC CGCGCATAAC GATTACTTTA AAAACGGTTA CGACAGTCTT
TTAAATGAGC TGGGCAAATG GGGCCTAAAC GCCAGTGACA TCATGCCGAA TATCAACTGG
TTCAGTAAAG TCCGCGTTGA AGATGACGGG AGCATGACTT ATGTGCCGAA CAATTCATCG
GCTGGAAACT ATGTTGATCT GCGTTTTGAA ATGGATGCCA TTGTCTGCCT TTCAACCGTC
CAACACCCGC TTGACCCGAA CCCAGACTAT AATCCAAAGC CAATTGATCT GACCGTATTC
AAAGCCGACT CAGTGAAAAA AGACGATGCG TGTCGTTTAC ATCGCGCAGA AAACGAGCGC
GCTTACTACA ACACCAAAAT CTACTATGGA GAAAATCCCA ATGACGAATG CTAA
 
Protein sequence
MTENTSNPSQ KMTRPGGFIW QEHLPGGAHW SGVIRRGTVL RLTDLEGNAN VSMLINNIEI 
KNERYNMPDT LKAQKTAFLT KPNMCFTDMG RVICSIIEDT CGWHDTIGGL SHAKLVHQKY
GDKSYQTAHN DYFKNGYDSL LNELGKWGLN ASDIMPNINW FSKVRVEDDG SMTYVPNNSS
AGNYVDLRFE MDAIVCLSTV QHPLDPNPDY NPKPIDLTVF KADSVKKDDA CRLHRAENER
AYYNTKIYYG ENPNDEC