| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1777 |
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| Symbol | |
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| ID | 3761415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1938787 |
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| End bp | 1940118 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637786515 |
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| Product | Outer membrane efflux protein |
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| Protein accession | YP_392043 |
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| Protein GI | 78486118 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.897239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGT TACATCATGT TATTTTCATG TTGGTCAGCA GTGTTTTGGG GATGTCATCC
GCCCAGGCGG TTGAACGCAA TCATCTGAAT TTATCCACAC TGTTTTCTTT AGCGGTTGAA
CATAATCCGA GCTTGAGCAA AGCGGCGGCC GATCAATCGG CCGCACTGAG CGCATTGCAT
AACACGGAAG GGTTACAAAA ACCTGAAGTA CGCTTTAAAA GTGAGCTCAG TTATGCCTGG
ATGTCTAAGG CCGAGTTTCC AAGAACGGCC AACCAGCTAG TGGCAACCTA TCCACTTTAC
CAACCGCAGC TGGATGATTT AAATCAAAAG TCGCAATTTG CCTATCAAGG AAAGCGACTG
GATCATGTGG CCGAAACACA AAAAGTGTTT TTAAACATTT CTCAGTTGTA CTTTATGTTG
TGGCAACAAC AAGAAAACTA TCGTTTTTTA GAAAAAGAAC AGCGTTCAAT TGAATCGATT
ATCAAGCAGG TCAAACAGCG CTTTCAGGTG GGGTATCAAG ATTTAAATGA TATTGCAGAA
ATTCAATCTC GTTTGGATTT TAACCGAGCC GAAATGCTGA AAGCCAAGCA GGACATTCGT
CAAACACAAG CTAACTTAAT GGCGGCACTC GGCGGGATTC GTCAGTCTGA AGAACGATTG
GATACATTGA CCTTTCCGCT TAAACGCCCT TTGGAAGTGG CCAAAATTGA ACAGATGGTA
CGGCAAGCGA AAGAGGATAA AAATGACCAG GCCTGGTCAT TTTTAGTTGA AAGTAATCCG
AAAGTGTTAG CTCTTCAGCA GCAATGGCTG GCCTCTCAAA AACAAGTGTC ATATGAAAAA
AACAAAGACA CCTTTCAGTT AGAAGCATTT GGTGCTTATG TTTATAACGA ATCGGATAAT
CATTTTTATG ACGATATGCA AGGCGCTCGA GGCGGTATTC AGCTAAATGT ACCGCTTTAT
TTAGGGGGTC GGACCGATGC GTCTGTTTCC ATGCAGCGCA ATCAAGCGCA AAAAGTTCAA
GCGGCTAAGC GAGAACTCAG TTTGGCCTTA CAGGCAAAAG CTGAAAATGC CTGGTTGGCT
TTGAAAGCGG GAACCAGTCG TTTAAATGCC CTTAAAGCGG CTTTGGATTC GAGCAAACAA
GCGGTTGAAG CCAATGAGCA AGCTTTGAGA ACAGGTCGAC GGAATATTCT CGATTTACTG
GATGCACAAC GTCAGTTACA CAAGATCGAA CGTGATATTC CGGTACTTAA AGCGTCGATT
TGGCAAAACG TTTATGCTTT CTATTGGGCT ATAGGAAATT TGAATCAAGA AACCCCTAAT
CAATTGAAAT AA
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| Protein sequence | MKVLHHVIFM LVSSVLGMSS AQAVERNHLN LSTLFSLAVE HNPSLSKAAA DQSAALSALH
NTEGLQKPEV RFKSELSYAW MSKAEFPRTA NQLVATYPLY QPQLDDLNQK SQFAYQGKRL
DHVAETQKVF LNISQLYFML WQQQENYRFL EKEQRSIESI IKQVKQRFQV GYQDLNDIAE
IQSRLDFNRA EMLKAKQDIR QTQANLMAAL GGIRQSEERL DTLTFPLKRP LEVAKIEQMV
RQAKEDKNDQ AWSFLVESNP KVLALQQQWL ASQKQVSYEK NKDTFQLEAF GAYVYNESDN
HFYDDMQGAR GGIQLNVPLY LGGRTDASVS MQRNQAQKVQ AAKRELSLAL QAKAENAWLA
LKAGTSRLNA LKAALDSSKQ AVEANEQALR TGRRNILDLL DAQRQLHKIE RDIPVLKASI
WQNVYAFYWA IGNLNQETPN QLK
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