Gene Tcr_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1776 
Symbol 
ID3761414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1938317 
End bp1938679 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content47% 
IMG OID637786514 
Producthypothetical protein 
Protein accessionYP_392042 
Protein GI78486117 
COG category[S] Function unknown 
COG ID[COG3767] Uncharacterized low-complexity protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.597953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAGC AATCAAGAAG AGATTTTTTA AAGTTAGCCA GCGCAACAAC TGCAGCCACT 
CTAACTGGCT CAGCCTTAGC CTCAGAAAAC CCGTTTGGAT TTAAAAAACT GGACGGTGGA
TACCAACAAG TTGCCGTAGA AGGGAAGTGT GGTGAAGGCA AATGCGGTGA AGGTAAATGT
GGTGGCGACA TGCGCAAAAA TATCCCACAG GAAGGCAAAT GTGGTGAAGG TAAGTGTGGT
GCTGGAATGG ACATGACACC TGACAAAACC CAAGAAGGCA AATGTGGTGA AGGTAAGTGT
GGTGCTGGAA TGGACATGAC ACCTGATAAA ACCGAAGAAG GTAAATGCGG CGGGCGAAGT
TAA
 
Protein sequence
MSKQSRRDFL KLASATTAAT LTGSALASEN PFGFKKLDGG YQQVAVEGKC GEGKCGEGKC 
GGDMRKNIPQ EGKCGEGKCG AGMDMTPDKT QEGKCGEGKC GAGMDMTPDK TEEGKCGGRS