Gene Tcr_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1765 
Symbol 
ID3761532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1926631 
End bp1927842 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content43% 
IMG OID637786503 
Producthypothetical protein 
Protein accessionYP_392031 
Protein GI78486106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGCGA CAAGTGCCAT TGCCTGGCAA CCTGAATTAA CCACACCTTT GCCAATTGAT 
CACTGGCTCG CGCCCAATCA AGACACCTAC TTTTTTTGTG ACTTGCATGC GGATGCCGAC
GCTTTTTTAC GGTCACTCAA ACTCAGTTAT CTGGTGACAC TCGACAGTAC GATTGATTCG
ATTCAGCTCA CCACCAAAGG CATGCATGGT CAAATCATTA TTGGAGGCGA TTGTTTTGAC
AAAGGCCCCA GTAACCTAGC GTTATTCAAA TTGATTCGGT TACTCAAACA GGCCCATTGC
GATTTGATTC TACTCGCCGG AAACCATGAC ATTCGTATTT ATGCCGGCTT ACTGGCCATC
GACTTTATGG ACAACCCAAG GCAAGCCCAC TTTTTTGTTC GGATGGGCCG AAAAACGGCC
AGTTTGTTTG CCGAGATTTA TCATGAATAC GGCCAAGAAA TGACGCCTTG CTCGTTAAGT
GACGCGGAAA TAAAAGCCGC CCTTTTACCG CCTAAAAGTT GGTTTAGCGC GTTTCCTGAA
TCGGTCAAAA ATGTTCTTTC TTTCAAAAAA ATTCAGAAAG AGATACGCCA GATTGAAAAA
AAACAAAACG ATTTTATCCA GGCGTGTTTT GAGCAAGGCT TGACACTCCA ACAGATTTAC
CAGGCTGCAC AAATGGCGAA ACGCTTATTT ATCGACAAGG ACGGCGAATT TGCCTGGTTC
TTCCAAAACC TGGATTTGGT CCATGTTTCT GGCAGCTATT GTTTTAGTCA TGCAGGCTTG
GATGATCGAT TTGCTGAAAA AATGAGACAT GATTCCATTG ACACTTTAAA TCAACAATTC
CGCCGTCAAA TGCAATCCGG TCAGATTTTT GAAATGTATT ACAGCGAGTT CGGCAATGTT
TTTCGAACTA AATACCGAGA CAATGACTGG CCACTGACTG AAAAAGGCGC TTGTATTTTA
AAGCAAAACA ACATTTTTGC GATGGTGAAC GGTCACCGCA GCCACCAACA AGGACAACAA
CTCTTTGTCC GTCAGGGTCT GTTAAATTTT GAGTGTGATA CCTTGATAAA TACAAATTGT
CGTCGAAAAT CTAACATACA AACCCTCGGG GAAGCTGTTA CAATTTTCTA TTCAGATGGG
ATGGTATCGG CTTTAAGCAG CGATTTTCCT GCAACAAAAC AGTTTCATCC CAAGCAGCTT
AAGCAACACT AA
 
Protein sequence
MYATSAIAWQ PELTTPLPID HWLAPNQDTY FFCDLHADAD AFLRSLKLSY LVTLDSTIDS 
IQLTTKGMHG QIIIGGDCFD KGPSNLALFK LIRLLKQAHC DLILLAGNHD IRIYAGLLAI
DFMDNPRQAH FFVRMGRKTA SLFAEIYHEY GQEMTPCSLS DAEIKAALLP PKSWFSAFPE
SVKNVLSFKK IQKEIRQIEK KQNDFIQACF EQGLTLQQIY QAAQMAKRLF IDKDGEFAWF
FQNLDLVHVS GSYCFSHAGL DDRFAEKMRH DSIDTLNQQF RRQMQSGQIF EMYYSEFGNV
FRTKYRDNDW PLTEKGACIL KQNNIFAMVN GHRSHQQGQQ LFVRQGLLNF ECDTLINTNC
RRKSNIQTLG EAVTIFYSDG MVSALSSDFP ATKQFHPKQL KQH