| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1750 |
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| Symbol | |
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| ID | 3762012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1910660 |
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| End bp | 1911697 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786488 |
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| Product | twitching motility protein |
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| Protein accession | YP_392016 |
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| Protein GI | 78486091 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACATTA CCCAGCTATT AGAATTTAGT GTGCAACACA AGGCGTCGGA CTTACATCTT
TCTGCCGGAA CCGCTCCAAT GCTTCGTTCT GACGGCGACA TTCGTCGAAT TGACCTGCCT
GAACTCGACG CTAAAACCAT TCAAGAAATG CTGTATGAAA TCATGTCCAA GCCACAGCAG
GAGCAGCTTG AAACCGCACT GGAAATCGAC TTTTCCTATG AGCTGCCACA CATTGCACGA
TTTCGAGTTA ATATTTTTCA ACAAAACCGG GGGCTCAGTG CCGTGTTTCG GACAATCCCG
AACCAGGTCA TGACGCTAGA AGAGCTCAAT GCCCCTGAAA TCTTAAAAGA AATTGCCCAA
ACCCCTCGCG GAATCGTACT GGTGACAGGG CCGACCGGCT CTGGAAAATC CACCACCCTT
GCGGCAATGA TTGATTTTAT TAACGAAACC CAGCAAGCAC ATATATTAAC CATCGAAGAT
CCGATTGAGT TTATTCATCA ACCTAAAAAT GCGCTCATCA ATCAGCGAGA GGTTCACCGT
GACACGCATC ACTTCAGTAG TGCATTACGT TCAGCTTTAC GAGAAGATCC CGATGTGATT
TTGGTTGGTG AGATGCGAGA CCTGGAAACC ATCAGCCTGG CATTAACCGC TGCTGAAACT
GGTCACTTAG TGTTCGCGAC CCTTCATACC AGCTCGGCAG CAAAATCCAT TGACCGCATC
ATTGATGCCT TTCCAGCGGG TGAAAAAAAT ATGGTTCGCT CAATGCTTTC AGAATCTTTA
AAAGCGGTAA TTTCTCAAAC CTTACTGAAA AAACAAAATG GTGGTCGGGT GGCGGCACAT
GAAATTTTAT TAGGCTCTCC CGCCATCCGA AACCTAATCC GGGAAGACAA AGTCCCCCAG
ATGTATTCTG TTATTCAAAC CTCAAACAAA CTCGGCATGC AGACACTGGA TCAGGATTTG
CAACGTTTGG TCAAAAACGG AACCGTGAGT AAAGAAGTCG CTCGAAGCAA AGCCGTGAGT
AAAGCTGACT TCTTATGA
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| Protein sequence | MDITQLLEFS VQHKASDLHL SAGTAPMLRS DGDIRRIDLP ELDAKTIQEM LYEIMSKPQQ
EQLETALEID FSYELPHIAR FRVNIFQQNR GLSAVFRTIP NQVMTLEELN APEILKEIAQ
TPRGIVLVTG PTGSGKSTTL AAMIDFINET QQAHILTIED PIEFIHQPKN ALINQREVHR
DTHHFSSALR SALREDPDVI LVGEMRDLET ISLALTAAET GHLVFATLHT SSAAKSIDRI
IDAFPAGEKN MVRSMLSESL KAVISQTLLK KQNGGRVAAH EILLGSPAIR NLIREDKVPQ
MYSVIQTSNK LGMQTLDQDL QRLVKNGTVS KEVARSKAVS KADFL
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