Gene Tcr_1747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1747 
Symbol 
ID3762009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1907425 
End bp1908534 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content44% 
IMG OID637786485 
Productpermease YjgP/YjgQ 
Protein accessionYP_392013 
Protein GI78486088 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAATTC TTGATAAATA TCTATACAAA GAGCTTTTTG CGACTTTTTT TGCGGTGTTG 
TCGGTTTTAT TGCTGATAAC GTTCGGAACG GAAGCGACGA AGTTGCTTGC CGTGGCGGTA
GAGGGCGCGA TTCCTTCAAC GGTTATTATG CAGGTGTTGC TGTATAAAAT CCCGCCGGCA
TTAGAAGTCA TATTGCCTTT GGTGGCGCTA TTAAGTGTGA TGTTAGCGGT TGGTCGGCTT
TATCAGGATC AGGAAATGGT GGTTCTGCAA AGTTGCGGCA TTGCAACAAG TTTCTTCCAA
AAGCGCGTGT TCTGGTTTTT AGTGCCGTTA GCGTTTTTAA CGGCCTGGGT TTCGTTGGTG
GTCACACCGT GGAGTTATGA ACAGGAACGA AAACTGATTA TGGAAGCGCA AACCACGTCG
CCTTTGGCCG CGTTGGTGCC TGGTAAGTTT AATCCGTTAC CCAATGGAGA AGGGATATTT
TATACCCGCT CCATTAAAAG CAACGGTGAT CTTGAATCTG TTTGGGTGCG GTTAAATACC
GACGAAAGAG ACATTTTGCT GATGGCGCCA AAAGGCAAGT TTGAGTGGAT TAATGGCAAA
CTGGTTTTGG TGTTATTAAA TGGTCGGAGT TATGAAGGTT TGAAAAAAGG TGATGACTTT
ACGGTTAGAG AGTTTGACCG TTTTGAAGGG TTTTTACCAG AAATTCAGTC GACTTCCACT
GCGCAACAAG TTTTTGAAAT ACCAACTTCT ACGTTATGGC AGTCGGATAA GCCTGAGCAT
GAAGCGTTAC TTCAATGGCG AATTGTGACG CCTTTTAGTA TTTTGGTTTT AGGGTTGTTG
GGGTTGAAAA TGAGTAAGTC CGGCCCGAGG GAAGGTCGGT TTGCAAAAGT TTTCTTCGCC
TTGGTGCTGT ATGTTATTTA CAATCAGTTA TTGGTGACTT TCCGAGAATC GATCAGTAAT
GAAGCCTTAT CCCCTTGGGT TGGTTTGTGG CCCATTCCCG TTGTTTTCTT GATGTACGCA
CTTTATCAAG GTTCTCTGCG ACCTGCCTGG TTTCAACTCC CTCATATACC TTTTGCGCTT
CCCTTTAAAA AAACGATAGA ACGAAAATGA
 
Protein sequence
MRILDKYLYK ELFATFFAVL SVLLLITFGT EATKLLAVAV EGAIPSTVIM QVLLYKIPPA 
LEVILPLVAL LSVMLAVGRL YQDQEMVVLQ SCGIATSFFQ KRVFWFLVPL AFLTAWVSLV
VTPWSYEQER KLIMEAQTTS PLAALVPGKF NPLPNGEGIF YTRSIKSNGD LESVWVRLNT
DERDILLMAP KGKFEWINGK LVLVLLNGRS YEGLKKGDDF TVREFDRFEG FLPEIQSTST
AQQVFEIPTS TLWQSDKPEH EALLQWRIVT PFSILVLGLL GLKMSKSGPR EGRFAKVFFA
LVLYVIYNQL LVTFRESISN EALSPWVGLW PIPVVFLMYA LYQGSLRPAW FQLPHIPFAL
PFKKTIERK