Gene Tcr_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1744 
Symbol 
ID3762006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1904135 
End bp1905043 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content42% 
IMG OID637786482 
Producthypothetical protein 
Protein accessionYP_392010 
Protein GI78486085 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGCAATC TTGTTAAACT CGGCTTATCG GCTTTTATTA TCGGGTTCAT TTTATATAAG 
TTTGATATTG CCGCTGTCTG GGATACCATG CTAGACGCCA GCTTAGGGCT TCTGATCGCG
GCACTGTTTG TTCAGATACT CAGCCAAACC ATTGCCGCTT ATCGTTGGTC TTTGATTATG
GACGCGCTTA AATTTAAACA CCCATTCTCA TTTTATTTTC GCAGTTATTT TAAAGGCAGC
CTGTTCAACC AAATTCTTCC CACCAGCATT GGAGGTGATG CTTACCGAAT CGCTGAAGTT
TCGGCGCACG GTGGCTTGGT TAAAGAAGCT TTTTATGGCG TGTTCATTGA CCGAATCGTT
GGACTGGTAG GGTTACTGCT CTTAAATTTA TTCGCTAATT CGTTTGAATT TAATTTAATG
CCATATGAGG TTTTCATGAC CATCAACCTT ATTCTGGTTG CGGCCTTGTT TGGCTTGTTT
GTGCTCATGG CCATCCACAA ATTCCCTATC TTTAAGCGCT ACAAGTTCAC CCGACTTTTT
TATGAGCTCT CTGAGCGTTT TCGCTTTATT TATAAAACGC CAAAACGCAT CAGTCAACAG
CTCGGCTTAT CCATCTTGAT TCACTTATTA TCAATGGTCG CCATTTTTGG TATTGGTCAC
AGCGTCGGAA TCAACGAGCC GTTAGTCGCT TATTTAGTGA TTATTCCGCC GGCCATTTTA
TTAACCATTC TCCCTATCTC TTTTGCAGGA TGGGGGGTTC GTGAAGGCGC TTTAATTGCG
CTCTTTATGA TGATTGGTAT TGATGAACAT TTAGTCTTAG CAATGTCTTT GCTGTATGGC
ATTATTTTAA TTTTAAGTGC CTTACCGGGG TTATTGTTTT ACCTCACCAG CCAGCACAAA
TATCTATAA
 
Protein sequence
MGNLVKLGLS AFIIGFILYK FDIAAVWDTM LDASLGLLIA ALFVQILSQT IAAYRWSLIM 
DALKFKHPFS FYFRSYFKGS LFNQILPTSI GGDAYRIAEV SAHGGLVKEA FYGVFIDRIV
GLVGLLLLNL FANSFEFNLM PYEVFMTINL ILVAALFGLF VLMAIHKFPI FKRYKFTRLF
YELSERFRFI YKTPKRISQQ LGLSILIHLL SMVAIFGIGH SVGINEPLVA YLVIIPPAIL
LTILPISFAG WGVREGALIA LFMMIGIDEH LVLAMSLLYG IILILSALPG LLFYLTSQHK
YL