| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1728 |
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| Symbol | |
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| ID | 3761027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1889714 |
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| End bp | 1890604 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637786466 |
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| Product | Flp pilus assembly CpaB |
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| Protein accession | YP_391994 |
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| Protein GI | 78486069 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTA AAACCAGCGA TTGGGTGGTT TACGGTATTG CTGCGCTTTC AGCAATCCTA
GCCATTGTGC TTGTATACGG CTATGTACAA AATCGAGTCG CCGAAGCCGA AGCAAATGCC
AGCACGAAAA CCATTACCGT TGTCGAAAAG CCTGAATTAC ATTCTATCGT GGTCGCCAGT
CGAGATATCT ATCGAGGTGA GAAGATAGAA GCCGATGATG TAAAAGTTCT TAATGTCCCA
ATGGAAGGGC TGGTTGTGAA AGGGGTCATT ATTAACCCAC AAAATGCAGT CGGTCATGTT
GCTCACCAAA AGATTTATGC GGGTGAATGG ATTTTAGCCA AAAAACTAAA ATTAGAATCT
CAGAGCCGTT TTCAGAGTGT TGAAGCTTTG CTAGAAAAGA CACGGCGCGC GATTCGGTTG
CCGATTGAGC CGGATACTGG CTTGTTAGGC ATTATCAGTC CGGGGGATCA TGTCGATGTG
ATCAGCGTTT TTGAAAGTGC TGACAGTAAG CGTATGGTGA GCCGCACCAT TTTGCAGAAT
ATTACGGTGC TTTCGATCGG GATTGAAAAC CAAATGCGTG CAAGTACAGC CGACTCTGAA
GAGGATAATC AAAATCTTTT TGCGAATAAG CAAGCCTCAA ACAAAAAGTC CATGGTGGCG
TTAGATGTGG ATACCACTCA GGCCGAAAAA TTGGCTTTGG CGATGAATGT GGGCGCGATT
CATTTGCTGT TAAGAAACTC GGCCGATACC GAATTAGTTG ACACCAAAGG GGTGAATTTG
AAAGTCATGG AAAAAGGTCA GCGAAGACCG CCTAAATATA AGCCTAAGAA AAAACGTGAC
GTCATTGAAC TCATGCAAGG TGGTGATGTA CAAGAGGTAA TTACACGATG A
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| Protein sequence | MKLKTSDWVV YGIAALSAIL AIVLVYGYVQ NRVAEAEANA STKTITVVEK PELHSIVVAS
RDIYRGEKIE ADDVKVLNVP MEGLVVKGVI INPQNAVGHV AHQKIYAGEW ILAKKLKLES
QSRFQSVEAL LEKTRRAIRL PIEPDTGLLG IISPGDHVDV ISVFESADSK RMVSRTILQN
ITVLSIGIEN QMRASTADSE EDNQNLFANK QASNKKSMVA LDVDTTQAEK LALAMNVGAI
HLLLRNSADT ELVDTKGVNL KVMEKGQRRP PKYKPKKKRD VIELMQGGDV QEVITR
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