| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1727 |
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| Symbol | |
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| ID | 3761026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1888155 |
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| End bp | 1889717 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637786465 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_391993 |
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| Protein GI | 78486068 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTT CTCATAAAAT TTTAACTCGG CTCGTTATCA TCAGCGTGGT GATGTTCCCT
AGTTTTTTAA AAGCCGCCCC ATTACCGGTT TATCATTTAA TGGCAACAGA AAGCCAGATT
GTTAAGTTTG ATTATCCGAT TAAAAGAGCC TTGGTGGCCA ACCCGGATTT AGCCAATTTG
AAGGTGTTAA ACAGTAAAGA GCTTTTGGTC AGTGGGAAGC AGGCGGGTAA GACCGAGCTA
ATTATTTGGT ATAAAAAAGC GCCGAATCAA GTTGGGCGTC ATATTGTTTT AAAGGTTGCT
CCAGATGCGT CTCGACGTGA AGAAATTGAG CAAACCGTTT CAACCTTGAT CCGTCAGTTG
GACCCCGATA AGAAGGTGAA ATTTGTACTA AAAAATATTT GGATAGAATC CAATTCATCG
GTACGACGCG AACTGGATAA TGTGGGGAAT CAAATTGACA ATGACTCTAC CATCAAATCG
AAAGGCAATA AGAATCAGGA TATTCTTCAA GAAACCCAAA AAGCGGGCAG TTTGAATATT
AAGCCAGTGG CAGGTAATTA CATGGTCTTA TTGACGGGGG AAGTTCCTAA TAAAGCACGT
AAGAAACGGA TTCAATCGGT GATTTCCGCC TTAGGGTTGA GTGTGGTCAA TATGATTGAC
GTCACAGGGA AAAGCCAGAT CAAGCTGTCG GTCAGAGTGG CAGAAGTGGT CAAAGGCAAT
CCGTTTAAAA GCGGGGTGGC GATTCGGGAT AAAAAAGATC GTTTTGGAAT TTTCCCCCCA
GGAAATTTAG GGACGCAGGC TTTATTCAGT TTGAATAATA GTCCGGGTGA CACTGCTGGA
ATCAGTTTTC CTCATCCTGA TGCTTTTCAA ATTGGGTTCA ATCCAGAAAA TGGCAGTATT
TTTGGGGTGT TGTCATTGTT GGAAGGGCAT AACCTGGCAC GTGTTTTGGC CAAGCCGGAA
CTGATTGTGC AATCAGGTGA GACAGCCACC TTTTTGGTGG GGGGAGAAGT TGCCATCCCA
GTTGCTCAAA ATGCAGATAC CATTACCGTT TCCTATAAAG AATATGGTGT AAGACTCCGT
TTCAGTCCCA TTGTGACCGA ATCTGGTGAT ATTCAGATGA CGGTGGAACC AGAGGTGAGT
GATATTGATG CAGCGAATGG AACACAGACC AACAATATCA TTATTCCTAG CTTTCGTTCA
CGAAAAACCT CCACGACTAT TACGCTGGCA CCAGGGCAGA GTTTTATAAT CGGCGGGTTG
TTGCAAGATA ATATTCGTTC ACAAGTCAGT AAGGTCCCTG TATTAGGTGA TATTCCAATT
CTGGGGGCGT TATTCCGTTC CAATTCGTAT GTGCATGACA AGTCCGAATT GGCGATTATG
GTGACGCCAA CTTTTGTAGC GCCTGTCGAT GCTGGTAAAA AAGTGAGTTT GCCAGGTGAA
AACTTAAAAA GACCCAGTAA TATGGATGCA TTTTTTCTTG GAAAGGTCGC AGAAGTTTTA
CCGGAAGGTG AAAGTGCGCT ACCTGAGTCG AATGTGAAAA TTGGTTTGGA GACAGTTGAA
TGA
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| Protein sequence | MKFSHKILTR LVIISVVMFP SFLKAAPLPV YHLMATESQI VKFDYPIKRA LVANPDLANL
KVLNSKELLV SGKQAGKTEL IIWYKKAPNQ VGRHIVLKVA PDASRREEIE QTVSTLIRQL
DPDKKVKFVL KNIWIESNSS VRRELDNVGN QIDNDSTIKS KGNKNQDILQ ETQKAGSLNI
KPVAGNYMVL LTGEVPNKAR KKRIQSVISA LGLSVVNMID VTGKSQIKLS VRVAEVVKGN
PFKSGVAIRD KKDRFGIFPP GNLGTQALFS LNNSPGDTAG ISFPHPDAFQ IGFNPENGSI
FGVLSLLEGH NLARVLAKPE LIVQSGETAT FLVGGEVAIP VAQNADTITV SYKEYGVRLR
FSPIVTESGD IQMTVEPEVS DIDAANGTQT NNIIIPSFRS RKTSTTITLA PGQSFIIGGL
LQDNIRSQVS KVPVLGDIPI LGALFRSNSY VHDKSELAIM VTPTFVAPVD AGKKVSLPGE
NLKRPSNMDA FFLGKVAEVL PEGESALPES NVKIGLETVE
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