Gene Tcr_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1716 
Symbol 
ID3761014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1877056 
End bp1877337 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content46% 
IMG OID637786453 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_391982 
Protein GI78486057 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTAG CGACCGCAAG ACATATTTTA GTAGAGACAG AAGCAAAAGC ACTAGAACTT 
AAAAAACAGA TTGAAGAGGG CGCGGATTTT GCCGATGTCG CAAAAGCAAA CTCTTCCTGT
CCTTCCAGCC GAAGTGGGGG TGATTTAGGT CAGTTTGGAC CCGGCATGAT GGTGCCGGAA
TTTGATAAGG TGTGCTTTTC AGCGGACGTA GGGTCTTTAG AAGGGCCAAT TAAAACGCAG
TTTGGTTATC ACCTTGTTGA GGTCACTGAT AGAACTGAAT AA
 
Protein sequence
MALATARHIL VETEAKALEL KKQIEEGADF ADVAKANSSC PSSRSGGDLG QFGPGMMVPE 
FDKVCFSADV GSLEGPIKTQ FGYHLVEVTD RTE