Gene Tcr_1705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1705 
Symbol 
ID3761003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1866397 
End bp1867476 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content44% 
IMG OID637786442 
ProductHEAT 
Protein accessionYP_391971 
Protein GI78486046 
COG category[L] Replication, recombination and repair 
COG ID[COG4335] DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0226919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCTT TAAAAAATTT TTACAACGCA GAACTGATTC ACGCACTGGC CGACACCCTT 
TCGCTTTACG AGCCTAACTT TAAACGTGAC GCATTTCAAA AAGCCGTTCT CAATAACGAA
TGGGAAATGC TTGAGCTGAA GCAACGTATT CAAACAATCA GCCTAACCCT GAATCGTTTT
CTGCCAAACG ACTTTGCCCA AGCCGCCCAC ATCCTGACAC AAACGGCTCA GCACTTTAAA
GGATTTGAAT ATATTTTCTT TCCGGATTAC ATCGAGCAGT TCGGGCAAAA TCACTATGAC
ATTTCCGTCC AAGCATTAGA AGCGATGACA CCTTATTCTT CGGCCGAATT TGCTGTGCGT
CCATTGATTG AGCGCTATCC GCAAAAAATG ATGGCACAAC TATTACAATG GACGCAGTCC
GAAAACGAGC ACGTCAGGCG TCTTGCCAGC GAAGGTTGTC GTCCGCGCCT TCCCTGGGCG
AAAGCTTTGA AAAAGTTTCA ACACGACCCT CATCCTATTT TGCCTATTCT GGAAGCACTG
AAACAAGACG ATAGCCGCTA TGTACGTAAA AGCGTCGCAA ATAATTTAAA TGACATTTCT
AAGGACCATC CTGAGCTTGT GCTACAAACC GCACAAAAAT GGATTGGAGA ACATCCGCAT
ACGGATTGGA TTTTAAAACA TGGTTGTCGG ACATTGCTGA AGCAAGCGCA CCCTGAAACT
CTGGCACTGT TTGGCTTTGC CAAGCCAAGT CATGACGAGC TCTCACTTTT TAATGTGCCA
GCACAAGTCG AAATCGGTGC CAGCTTAAAA ATGATCATTG CATTACAAAC GCCGCAAGCC
AAATTGGGTA AACTTCGTGT AGAGGTCTGT TTACATTACC GACGTGCCAA CGGCCAGTTA
TCTTATAAAC GCTTTAAAGT GGTTGAAGGA TATTACGGAA AAGAAAAAAA GATCGAAAAG
TATCTGTCTT TCCAACCTTT GTCCACCCGA CGTTATTACC CGGGTGAACA TAGCCTGACC
TTGATTATCA ATGGTCAACC AATGGCTGAA AAATCATTTG AACTGGTGGG GAAACCTTAA
 
Protein sequence
MDPLKNFYNA ELIHALADTL SLYEPNFKRD AFQKAVLNNE WEMLELKQRI QTISLTLNRF 
LPNDFAQAAH ILTQTAQHFK GFEYIFFPDY IEQFGQNHYD ISVQALEAMT PYSSAEFAVR
PLIERYPQKM MAQLLQWTQS ENEHVRRLAS EGCRPRLPWA KALKKFQHDP HPILPILEAL
KQDDSRYVRK SVANNLNDIS KDHPELVLQT AQKWIGEHPH TDWILKHGCR TLLKQAHPET
LALFGFAKPS HDELSLFNVP AQVEIGASLK MIIALQTPQA KLGKLRVEVC LHYRRANGQL
SYKRFKVVEG YYGKEKKIEK YLSFQPLSTR RYYPGEHSLT LIINGQPMAE KSFELVGKP