Gene Tcr_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1702 
Symbol 
ID3761000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1861373 
End bp1861966 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content45% 
IMG OID637786439 
ProductTetR family transcriptional regulator 
Protein accessionYP_391968 
Protein GI78486043 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATT TTTTTGAAGA AGCCGACATC AGCGCATCGA AAAAAAGAAT CTTAAACAGT 
GCGTTGGTGT TGTTTGTTGA AAAGGGTTTT TTTAACACGT CTATTCCTGA TTTGGTGGCG 
CACTCCGGAG TGAGTACGGG ATCGATTTAT TATGCGTTTA AAGACAAAGA GCACCTGGCG 
ATGACGCTGA TGGACTTGTT GCTGGCCAAG GTCGAAGACG ACCAGGCGAA GTTATTGACA 
ACCTACTCTG ATTGCTGGCA ACGATACTAT CATTTAGCGA AATGGTTGTT TGAGTTGACG 
GAACAGTTTC CACATGTGAT GCAGTTTATT TTATACGCGC GGCATCGTGA GTTTATGCCA 
ACGATTCAAC CGCTATGTTC TTCCAAACCT TTTATGACGT TAAGAGGTGT ATTAGAGGAA 
GGGCAACAGT CGGGTCAAAT TCGAGCGATG GACTTAATGG TGGCGTCTTC CATTGCGTAC 
GGCAGTATTC TGAGATTGAT TCAGTTGCAT TTGGATGGCT TAGCCCCTGA GCCGTTGAAC 
GAACATTTAG ATGAACTCAC CCGCGCGGCT TGGCGCGCGA TTAAAGCAGA TTGA
 
Protein sequence
MANFFEEADI SASKKRILNS ALVLFVEKGF FNTSIPDLVA HSGVSTGSIY YAFKDKEHLA 
MTLMDLLLAK VEDDQAKLLT TYSDCWQRYY HLAKWLFELT EQFPHVMQFI LYARHREFMP 
TIQPLCSSKP FMTLRGVLEE GQQSGQIRAM DLMVASSIAY GSILRLIQLH LDGLAPEPLN 
EHLDELTRAA WRAIKAD