Gene Tcr_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1700 
Symbol 
ID3760998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1859797 
End bp1860945 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content45% 
IMG OID637786437 
ProductBeta-lactamase-like 
Protein accessionYP_391966 
Protein GI78486041 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAT TAGAAGGTAA ACGAACCCAG GTGAGATTGA CATTTTTAGC ACTGATTGTT 
TTTTCATTGA TTCTAGCGGC ATCGCCAATG ATTTATGCGT CGCAGCAAAA AGAATTATCC
GATCCTTATT TAAGAGGCTT TTCAGCCTAT GCCAAAGAAA TTGGATCCAG CAGTGGCGCA
CAGGATGTGT ATGAAAATTA CGTGAACGAA GTGGCAAAAG TAGAACAAAA AGCTGGCTAT
ATCGGTCCTA TTTTACCGTT ACCGAAACCG GTAAAAGTGA TGGATGGCGT CTATACGGTG
GTCGGAAGTT TGATTTGGCA CAACCCATCC AATTATGGTT TGAATAATAA TTTGACCTTT
ATGGTGTTTG ACGATGGCGT GTTTGTTTTT AACGCCGGGC CGAATCCAGC GGTAGCCGCC
TCTTTTCATC GCCAGATTCA AACGATTACT CACAAACCGG TCAAATGGGT GGCGGTTGAA
AACAGCCAGG GGCATGCTTA CTTGGGTGCC AGTTACTGGG TGGATATCGG CGTTAAGAAA
CTGTATTCTC ACCAGCGAGC CAATGAGGAT TTTCATCAAG GATTTGATGC CATTAAATCG
CATTGGTCAA CGCGCGTGGG CAAAGTTCTA ACGCACACTG CGCGTGACGT GTCAGACCAA
TTTATAACGT TTGAGGATAA AATGACCGTG GATGTTGGCG GAGGAGAAAC GGTGGAAATC
CTCAACTTTG GTCCAGGGCA TACGCCCGGC TCGACTTTGC TGTATGTGCC GTCACGAAAA
TTATTGCTGA CGGGCGATTT AGCCTATAAC AGTCGTATGC TGGCGCTGTT TTCGTATACC
AATACGTTAG ATTGGGTGGG CTCATTCGAA CGGATGATGG CTTCCATTCC TAAGGATGTT
AGCGTCATTC CAGGGCATGG CGCACCGACC AATATGGCCA CGATTAAACG AGACACTTAT
GACTATCTCA AATACATGCA CTCAGAGGTT CAAAAAATTA TTGAGCGAGA CGGCACTGAA
GAAGAGGCTC TGCTGATTGA CCAATCCCAG TATCAACATC GATCGGTGTA TGAACAAACC
CATCAGAATA ATGCCAGCCA TATTTACCGT GAAATGACGG GGGGCGATTT AGGTCAAAAC
TTTGAATAA
 
Protein sequence
MNELEGKRTQ VRLTFLALIV FSLILAASPM IYASQQKELS DPYLRGFSAY AKEIGSSSGA 
QDVYENYVNE VAKVEQKAGY IGPILPLPKP VKVMDGVYTV VGSLIWHNPS NYGLNNNLTF
MVFDDGVFVF NAGPNPAVAA SFHRQIQTIT HKPVKWVAVE NSQGHAYLGA SYWVDIGVKK
LYSHQRANED FHQGFDAIKS HWSTRVGKVL THTARDVSDQ FITFEDKMTV DVGGGETVEI
LNFGPGHTPG STLLYVPSRK LLLTGDLAYN SRMLALFSYT NTLDWVGSFE RMMASIPKDV
SVIPGHGAPT NMATIKRDTY DYLKYMHSEV QKIIERDGTE EEALLIDQSQ YQHRSVYEQT
HQNNASHIYR EMTGGDLGQN FE