| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1689 |
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| Symbol | |
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| ID | 3760967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1843301 |
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| End bp | 1844374 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637786426 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_391955 |
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| Protein GI | 78486030 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTG ATCCAAATTT CTGGCAAGAC AAACGTGTTT ACTTAACGGG GCATACTGGT
TTTAAAGGTA GTTGGTTGTC GTTATGGTTG GCTGAAATGG GCGCAGTTGT AAAAGGATAT
GCGCTAAACC CTCCTACCAA TCCCAGTTTG TTTGAAGAAG CAAATGTTGC TGAAAAAATT
GATTCGCAAA TTGGTGATAT TCGCGATTTT GAAATCTTAA AATCCAGTAT GGTTGCTTTT
AATCCGGATG TTTTGATTCA TATGGCGGCT CAACCTCTCG TAAGACTCTC TTACAGAGAG
CCTCTTGAGA CTTATGATAC CAATGTAATG GGGACGGCTA AGGTTTTGGA AGCGGCTAGA
AGCTGCCAAA ACCTAAAAGC GATTGTTAAT GTCACTACTG ATAAGTGTTA TGAAAATAAA
GAATGGGTTT GGGGGTATCG AGAAGATGAA CCAATGGGTG GTTATGATCC TTATTCCAGT
TCAAAAGGTT GTGCCGAGTT GGTTACATCT GCATATCGTC GTTCGTTTAT GCAAGAGCAA
GGTGTTGGTT TAGCATCAGC TCGTGCTGGT AATGTTATTG GAGGTGGTGA TTGGGCGGAT
GATCGTTTAA TACCAGATAT TCTAAGAGCA TTTGAACAAA GCAAACCTGT TGTTATCCGT
AACCCGGCTT CAACACGTCC TTGGCAACAT GTTTTAGAGC CTTTATCAGG CTATCTTGTC
TTGGCACAAA ACCTTTATCA AAATCCACAA GAATTTTCTG AAGGTTGGAA TTTTGGACCT
TATGATGAAG ATGCCAAGCC TGTTGATTGG ATTTTGGATC AGATCGTAAC CGTGTGGCCA
GAAAATCAAT GGCAATTGGA TGAGGGAAAC CACCCTCACG AAGCCAGCTA TCTAAAGCTT
GATATTTCCA AAGCTAAAAC CCGGTTGGGC TGGCAGCCGG CATGGCGTCT AAATCAAACC
TTGGAAAGAA TTGTAAGTTG GCATCGTGCT TGGCTGAATG GTAAAGATAT GCACGCTATT
TGTCTACAAG AAATTAATGA ATATATGAGA GATATGAAAA ATGCAAACTC CTGA
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| Protein sequence | MKVDPNFWQD KRVYLTGHTG FKGSWLSLWL AEMGAVVKGY ALNPPTNPSL FEEANVAEKI
DSQIGDIRDF EILKSSMVAF NPDVLIHMAA QPLVRLSYRE PLETYDTNVM GTAKVLEAAR
SCQNLKAIVN VTTDKCYENK EWVWGYREDE PMGGYDPYSS SKGCAELVTS AYRRSFMQEQ
GVGLASARAG NVIGGGDWAD DRLIPDILRA FEQSKPVVIR NPASTRPWQH VLEPLSGYLV
LAQNLYQNPQ EFSEGWNFGP YDEDAKPVDW ILDQIVTVWP ENQWQLDEGN HPHEASYLKL
DISKAKTRLG WQPAWRLNQT LERIVSWHRA WLNGKDMHAI CLQEINEYMR DMKNANS
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