| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1687 |
|---|
| Symbol | |
|---|
| ID | 3760965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1841069 |
|---|
| End bp | 1841998 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637786424 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_391953 |
|---|
| Protein GI | 78486028 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGC AAACCCTTTT GTTGACAGGC GCAACAGGCT TTATCGGCAG TCACTTGCTT
GGCAAGCTGT TGGAGCAAGG TTATGACGTT GTAGTTCTAA AACGCTCAAG CTCTGATATT
TGGCGAATCC AGCATTTAGC CGATCAGGTG AGAATGTATG ATGTCGATAC ACAGCCCGTC
TCGGAAGTGT TTGAATCCGA AAAAATCGAT GTTGTCATTC ATATGGCAAC CTTGTATCGC
AAGTTTGACA ATGGAAATGA GGTGTCGGAG ATGTTGGCTT CAAATGTCAC ATTTCCGACA
GAAATCCTGG AAGCGGGTGC CCGTAACGGG ATAAAAGGGT TTATTAATAC CGGCACTTTT
TTCGAATATG ATTGTTCTAG ACAGCCGGTT GATGAAAATG CCCCGATCGT CCCTTTTAAT
TTCTATGCAA AGACCAAGCT TGCTTTCGAA ACCGTTTTAA AAACACACTC AGATACGATG
ATGGTCAATA CCTTTAGGCT ATTTTCGCCC TACGGTGAAA AAGATAATCA AAAGCTGGTT
CCCATGATTA TCCAAAAAGC ATTGAAGGGG GAGGCAATCG AGTTATCCGA AGGGCTACAG
AAAATTGATT TGATTTATGT GGAAGATATT GTTTCAGGCT ATATGAAAGC GGTGGAGAGA
ATCTTGTCAG ACACTTTTCA GCCTGAATAT GAGGTGTTCA ACCTGGGATC TGGTGTTGCC
TTGAGTATCC GGGATGTCGT TTCGATTGTA GAGCAAAAAA TCGGAAAGCC GCTTAAGAAA
ACTTGGGGAG AAGCCTCGGA GGTTGATATT CCTATTGCCT ATGCGGACAT TACAAAATTG
GCTCGAATTT TACATTGGAA ACCTGAATAT ACAGCTTCAC AAGGTATTGA AAATACCGTC
AACTTTTACC AGAAAGAAGG AATGAAATGA
|
|---|
| Protein sequence | MTQQTLLLTG ATGFIGSHLL GKLLEQGYDV VVLKRSSSDI WRIQHLADQV RMYDVDTQPV
SEVFESEKID VVIHMATLYR KFDNGNEVSE MLASNVTFPT EILEAGARNG IKGFINTGTF
FEYDCSRQPV DENAPIVPFN FYAKTKLAFE TVLKTHSDTM MVNTFRLFSP YGEKDNQKLV
PMIIQKALKG EAIELSEGLQ KIDLIYVEDI VSGYMKAVER ILSDTFQPEY EVFNLGSGVA
LSIRDVVSIV EQKIGKPLKK TWGEASEVDI PIAYADITKL ARILHWKPEY TASQGIENTV
NFYQKEGMK
|
|---|
| |