Gene Tcr_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1686 
Symbol 
ID3760964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1840545 
End bp1841072 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content35% 
IMG OID637786423 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_391952 
Protein GI78486027 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATCA CCCCAACCCC TATAGATGGC GTGTTCGAAA TAGAAAATAA AGTATTTGAA 
GATTTTAGAG GGAAATTTGT GAAAACTTTT CATGAAGAAG TATTCAGGTC CCACGGCCTT 
GAATCTAATT TTAAAGAAAG TTTTTATTCC GTATCAGGTA AGAATGTTCT TCGTGGGATG 
CACTTTCAAC TTCCACCTCA TGATCATGCT AAATTAGTTT ATGTTACCAG TGGTGAAATC 
TTGGACGTTG CGGTTGATAT TCGTGAAGAA TCATCTACAT TTGGAAAATA TTTCGCAACA 
AAATTATCAG CTAAAAATGC AAAATCTTTA TATATGGACA AGGGGTTTGC ACATGGCTTT 
TTAACCTTGT CTGATTTCGC TTCGGTTACA TATTTGACAA CTTCTGTTCA TGCTTCTGAA 
TATGATACTG GAATTCACTG GAATAGCTTT GGCTTTGATT GGGAAGGCGT TGAAAAGCCG 
ATTGTTTCTG AAAGAGATAA AGCACTTGAA TATTTATTTG AAAAATAA
 
Protein sequence
MIITPTPIDG VFEIENKVFE DFRGKFVKTF HEEVFRSHGL ESNFKESFYS VSGKNVLRGM 
HFQLPPHDHA KLVYVTSGEI LDVAVDIREE SSTFGKYFAT KLSAKNAKSL YMDKGFAHGF 
LTLSDFASVT YLTTSVHASE YDTGIHWNSF GFDWEGVEKP IVSERDKALE YLFEK