| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1684 |
|---|
| Symbol | |
|---|
| ID | 3760962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1838378 |
|---|
| End bp | 1839235 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637786421 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_391950 |
|---|
| Protein GI | 78486025 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTAG ACTATAATCC AAAAGTAAGT GTATGTGTTC CTGTATATAA TGGGGAACAG
TTTATTAAAG AGACAATACA TTCTATTCAA AAGCAAACAT ATTTAAATCT TGAAATCTTG
ATTCAGGACA ATGCTTCTAC AGATCAAACA TCAAAGATTA TCTCTGATAT GAAGGACAGA
GATGAGAGAA TCAAGATAGT GCGAAATGAT AATTTAGTGT CAATGGCTGC TAATTGGAAT
ATAGTCATAA GCCGGGCTTC AGGTTCATAT GTGACACTTT TAAGTGCTGA TGATTTGTTA
AAACCGACTT TTGTTGAGGA ATGCCTTAAG GTTTTTAGAG TAAGTGAAAA TATTGATTTC
GTTTCAACAG AACATTGGTT GCTGACTAGT AAAGGTATCA AAAGAAGAAA AGTACCTGTT
AAGTCTGGTA AGAGAATAGT CTCTTGTGAA GAGGTTTTAT TAAAAAACCC TTTTTCGATT
AATTTTACAA TTTTTAGAAA GGATTTTCTT GAGGGAATAT CTTTTCAAAG CACAAAAGTT
TTTCGAGAAC CTTATTTTAC TTGTGATTAC GATTTATGGA TAAGAGCAAG TTTGAGCAAA
GCAGTTGTGT ATTTTATTGA TCAACCTCTT GCATATTACA GAGTACATGA AGCCTCGTTG
TCAAAAAACC TCTTGAAAAT GATTAAGCAT ACGACATTAG TTTTATCTGC AAATGAAGTT
TTATTGAGAT CTAATTGTGA TGTTATATTT AGATTTACTA TGTTAAGGCT TTTGTTAAGA
GTTGGAGTTG TTTTTGTTAA AACTGGCGTT TTAAATAAAA AATTAACTAA ATATATGTGT
AAAAAGGTGC TCAATTAG
|
|---|
| Protein sequence | MSVDYNPKVS VCVPVYNGEQ FIKETIHSIQ KQTYLNLEIL IQDNASTDQT SKIISDMKDR
DERIKIVRND NLVSMAANWN IVISRASGSY VTLLSADDLL KPTFVEECLK VFRVSENIDF
VSTEHWLLTS KGIKRRKVPV KSGKRIVSCE EVLLKNPFSI NFTIFRKDFL EGISFQSTKV
FREPYFTCDY DLWIRASLSK AVVYFIDQPL AYYRVHEASL SKNLLKMIKH TTLVLSANEV
LLRSNCDVIF RFTMLRLLLR VGVVFVKTGV LNKKLTKYMC KKVLN
|
|---|
| |