Gene Tcr_1683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1683 
Symbol 
ID3760961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1837093 
End bp1838376 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content28% 
IMG OID637786420 
Producthypothetical protein 
Protein accessionYP_391949 
Protein GI78486024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTTC CTTTAACTGG AGTTTTTGCA TTTATATTAT TAATACCAGC TATTCTAATT 
GGGCATAAAG TATTTTTACA TTATGCTATT TTTTTTATGC CGTTCTCTGC TGTTTCAGTT
TTTAATTTCA CTGCTTCAGA AAATACTATT TCGTACTCAT TGTTTTTTTC ATTAACATAT
TTAATTTCAT TTTTAATTTT TCGTTTAGGT GTTTTTAATT TGTTAAAAGT TAAGTTTGGG
GTGGTAGGCT TTGTTTTTAT TTTCTATTTA TTCATTATCC ATTTCTTTTT AGAAAATAAT
TTATCTAACG ATCAATTTAT TAATGAATTT TCATATTTTC AATTATTATA TTTAATAATA
GGTGTCTTGC TTACCTTATC AATCGCGATT GATATATATA AGCACGGTTA CTATGTAAGA
GTTTTAAATA CAATAGTATT TTCTATGTTT ATTGCTGGTT TAGTAGGGTT ATATCAAGTT
TTATCATTTA ATTATGGTCT ATATTATCCA GTCGAGTATT TTAATAATAG TATAAGTCCT
TATGCTCAAG GATACTCAGC GGTATTAGGT GATGGATTAA AAAGGATTTC ATCTGTTTCT
ACAGAACCTT CAATTTTTGC ACAGTGGTTA GTGGTTTGTT CTTCAATATT TATTTTTATG
AAGTTATTAG GTACCAAGTT AGGAGTTTTT ACTGGTATTG TCTTAATTAA TAATTTTTTT
ATTTTAGTTT TATCAACCTC AGCAACTGCA TATATCGGTA TTTTTATTTT GTTTGGTTTG
ATTCTTTTTA CAAAACTAAC TTTAAAAAAG AATTTAGAGT TCCTTGTTTT AATCATAGCT
TTTACTTTGC TTGTGTTTAT ATTTAGTGCC CCTTATATAG CTGAACTGAT TTTATTGAAA
TTATCATCTT ATTCGTTTAT GGAAAGGTTC AGTTCAATAA TTTTTGGGTG GTTAGCTTTT
TTAGAAAGCC CTCTTGTAGG TTCTGGCTGG GGTGTTATAA CAGTGCATAG CCTTATAGTC
GGCTTGCTAG CAAATACCGG TTTGATTGGT CTTATCATAT TTTGCTATTG GATGTGCAGA
GAAATCAGCA TGTCAATTAA GTTTTCTGTA GAAAAGAAAG CATTATTTAA TGGTCAGTCA
GTATTGTTTT CCGTTTTCAT CTTAATAATA TTGCAAGTTG TGACAGGCTT TGTTTATACG
TATTCATTTT ATTGGATTAT TTTTGGCATA TTAGTAGGTC AGAACCTACT TGCTTACTCC
TACAGGAAAC AAACTAGATT ATGA
 
Protein sequence
MEVPLTGVFA FILLIPAILI GHKVFLHYAI FFMPFSAVSV FNFTASENTI SYSLFFSLTY 
LISFLIFRLG VFNLLKVKFG VVGFVFIFYL FIIHFFLENN LSNDQFINEF SYFQLLYLII
GVLLTLSIAI DIYKHGYYVR VLNTIVFSMF IAGLVGLYQV LSFNYGLYYP VEYFNNSISP
YAQGYSAVLG DGLKRISSVS TEPSIFAQWL VVCSSIFIFM KLLGTKLGVF TGIVLINNFF
ILVLSTSATA YIGIFILFGL ILFTKLTLKK NLEFLVLIIA FTLLVFIFSA PYIAELILLK
LSSYSFMERF SSIIFGWLAF LESPLVGSGW GVITVHSLIV GLLANTGLIG LIIFCYWMCR
EISMSIKFSV EKKALFNGQS VLFSVFILII LQVVTGFVYT YSFYWIIFGI LVGQNLLAYS
YRKQTRL