Gene Tcr_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1681 
Symbol 
ID3760959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1834960 
End bp1836111 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content35% 
IMG OID637786418 
Productglycosyl transferase, group 1 
Protein accessionYP_391947 
Protein GI78486022 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTA ATGAAGTGAA AATAGCTATT ATTCATGACT GGTTAGTCAC CTATGCTGGA 
GCTGAACGAG TTTTAGAGCA GATATTAAAG GTTTACCCTG GCGCTGATTT ATTTAGCATG
GTTGATTATT TACCAGAGGG GCAGCGGGAT TTTATTTTAA ATAAATCAGT TTCTACTTCA
TTTATTCAAA AGCTTCCATT TTCAAAAAAG AAGTATAGAA GTTACTTGCC ATTAATGCCT
TTAGCTGTAG AGCAATTTGA TTTATCTCAT TATGATTTAG TTATATCTTC ATCTCATGCG
GTTGCTAAAG GTGTGATTAC TGGACCTGAC CAATTACATA TTTGTATGTG TTATTCGCCA
ATTCGCTATG CATGGGATTT ACAACATCAA TATTTACGGG AATCTGCTTT AGATAGAGGG
TTAAAAGGGT TTTTTGCAAA ATGGTTTTTG CATAAAATTC GTATATGGGA TCTACGAACA
GTCAATGGAG TAGATAAGTT TATTGCGATT TCTGATTTTA TTGGTCGTAG AATTCAAAAA
GTTTATCGTC GTCATTCAAC TACAATTTAT CCTCCCGTGT ATATCAATGA TTTTGTAATG
TCGAATAATC AAAAAGAAGA ATTTTACTTT ACGTCTTCTC GAATGGTTCC TTATAAAAAA
ATAGATTTAA TTGTAGAAAC GTTTACAAAG GCTTTACCCG AGAAAAAATT GATTGTTATT
GGAGATGGAC CTGACTATGA AAAGATTAAA AAGCTTGCTG GTAAAAATGT AGCATTATTA
GGATATCAAA AGTTTGATGT TTTGAAAGAG CACTTAGCAC AAGCTAAAGC TTTTATTTTT
GCCGCAGAGG AAGATTTTGG CATTGCTCCT TTAGAGGCGC AGGCTAGTGG TACACCTGTG
ATTGCTTTTG GAAAAGGGGG AGCGTTGGAA ACTATTGTAG GTTTAGGAGA AGACAATCCT
ACGGGCGTAT TTTTTAAGGA GCAGACTGTT GAATCGCTAG CTCTTGCAAT CAGCGTTTTT
GAAGATCATA TGAATAACAT TGACGCCAGT GACTGCATTC AAAATGCTCA GCGTTTTAGC
GATGAAAGGT TTAGGAAAGA ATTTAAAGAT TTTGTAGGGC AAGAATATAA GAAATGGAAG
GATAATTTGT GA
 
Protein sequence
MKLNEVKIAI IHDWLVTYAG AERVLEQILK VYPGADLFSM VDYLPEGQRD FILNKSVSTS 
FIQKLPFSKK KYRSYLPLMP LAVEQFDLSH YDLVISSSHA VAKGVITGPD QLHICMCYSP
IRYAWDLQHQ YLRESALDRG LKGFFAKWFL HKIRIWDLRT VNGVDKFIAI SDFIGRRIQK
VYRRHSTTIY PPVYINDFVM SNNQKEEFYF TSSRMVPYKK IDLIVETFTK ALPEKKLIVI
GDGPDYEKIK KLAGKNVALL GYQKFDVLKE HLAQAKAFIF AAEEDFGIAP LEAQASGTPV
IAFGKGGALE TIVGLGEDNP TGVFFKEQTV ESLALAISVF EDHMNNIDAS DCIQNAQRFS
DERFRKEFKD FVGQEYKKWK DNL