Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1679 |
Symbol | |
ID | 3760957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1833076 |
End bp | 1833951 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637786416 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_391945 |
Protein GI | 78486020 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCGG ATTCTCATTC TAATAAAGTT CTTATAACAG GATTAGATGG TTTTACTGGC CAATACCTTA AATCTGACCT TGAGCTAAAT GGGTTTCAGG TCGTTGGGCT AACTGCCAAT TTAATTGATC GTGAAGCGGT AATAAGTGAG GTTCTAACAT TAGAGCCAGA TTACGTTGTG CATCTTGCAG GAATCTCCTT TGCGGCTTCT GAAGATACCG CTTCTATTTA CTCAGTTAAT GTATCAGGCA CTGTGAATCT ATTAGACGGG TTATCTCAGC TAAACCATTC ACCTAAAAAA ACGATTTTAG CCAGTAGTGC GACCGTGTAT GGCAATGTAA CTGGTTCGGT ATTGTCTGAA TCTATCTGTC CAAAACCGAT TAGTCATTAT GGGTGCAGTA AATTGGCCAT GGAGCATATG GCTCAAAACT ATACTGATAA ATTTCCATTA ATCATCACCC GGCCATTTAA TTACACCGGC ATTGGTCATG CAGAGCACTT TCTTATTCCT AAAATAGTTA AAGCCTATCA AGATAAAAAA ACAGTTATTG AGTTAGGTAA TTTAGATGTT TCCCGCGAAT TTAATGATGT GCGTGATATA TGTAAGATTT ATCTCGATTT GTTGTTGAGT GAGAAAGATG GCATAACTGT AAATGTATGC TCTGGGAAAA CTGTTAGTTT AATGAGTATT GTTTCGTTAA TGGATCAGAT AGCAGGTTAT AAAATGAATG TAAAAGTAAA TCCTGCATTT GTTCGTGAAA ATGAAATTAA AGATTTGTCC GGTGATGTTT CATACTTGAA TGATTTGGTT AAACCAGAGT TTAAATACGG TATTGAAGAT ACTTTACGCT GGATGTATGG AGAAATATAT GATTAA
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Protein sequence | MKPDSHSNKV LITGLDGFTG QYLKSDLELN GFQVVGLTAN LIDREAVISE VLTLEPDYVV HLAGISFAAS EDTASIYSVN VSGTVNLLDG LSQLNHSPKK TILASSATVY GNVTGSVLSE SICPKPISHY GCSKLAMEHM AQNYTDKFPL IITRPFNYTG IGHAEHFLIP KIVKAYQDKK TVIELGNLDV SREFNDVRDI CKIYLDLLLS EKDGITVNVC SGKTVSLMSI VSLMDQIAGY KMNVKVNPAF VRENEIKDLS GDVSYLNDLV KPEFKYGIED TLRWMYGEIY D
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