Gene Tcr_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1677 
Symbol 
ID3760955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1830317 
End bp1831690 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content39% 
IMG OID637786414 
Productphosphomannomutase 
Protein accessionYP_391943 
Protein GI78486018 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATA ATATAAAATC TCTGTCTAGC TTTAAAGCCT ATGATATTCG AGGAAAAGTT 
CCAGAAGACT TAAATGAAAC TCTGGCTTAT AAAATAGGCA AAGCTTATGT AGCTGAGTTG
GGTGCAAAAA GGGTAGTGGT TGGTTATGAC ATACGTTTAG AAAGCCAAAG CTTGGCAGAT
GCGTTAAAGA AAGGTTTAAC TGAAGCGGGT GCAGATGTTT TGGATATTGG CTTATGTGGT
ACAGAAGAAG TCTATTTTTC GACTTTTTAT CACAAAACGG ATGGTGGGAT CATGATTACA
GCAAGTCATA ATCCTAAAGG CTATAATGGC ATGAAGTTAG TTGCTTCAGG TTCAAAACCC
ATTTCTGGAG ACACAGGCTT AAAAGAAATT GAGCGTCGAG TGATTGAAGA AGATTTTAAA
CACTCTGAAA GTACGCAAAA TCAACCAGGC CTGGTGATTT CTGAAACTGA TAAGTCTGCT
TATATTGATC ATTTACTTTC TTACGTTGAT TTGTCGAAAT TAAAACCATT GAAAATTGTC
ATGGATGCAG GTAATGGTTC TGCGGGCGCG GTGATAAAAC AAATTTCTGA AAGGTTACCC
TTTAAGTGCT TTTTTGTAAA TGAAGTGCCA GATGGGAATT TTCCAAATGG TGTGCCAAAC
CCTCTTCTTC CAGAAAATAG AAGCACAACC TCTGATGCAG TAAAACAACA CCAAGCTGAT
TTTGGTGTTG CTTGGGATGG CGACTTTGAC CGCTGTTTTT TGTTTGATGA AAACGGTGAT
TTTATTGAAG GCTACTATCT GGTTGGACTG CTGGCTGAAA CACTTTTGGC CAAAAATCCT
GGAGAAAAAG TCATTCATGA CCCACGTTTG ACATGGAATA CAATTGATCA GGTGCAACAA
GCGGGAGGGG TTCCGGTTCA ATCCAAAACA GGTCATGCCT TTATCAAAGA GCGTATGCGA
CTGGAGGATG CTATTTATGG TGGGGAGATG TCAGCACACC ATTACTTTAA AGATTTTGCG
TATTGTGATT CAGGGATGAT TCCATGGTTA TTGATTGCAG AGTTAATGAG CAAAACTGGG
AAGTCATTAT CTTCTTTAGT AAGTGAGCGA ATGCAAGCTT ACCCATGTAG TGGCGAGATT
AACTACACTG TCAATGATGT GCCTGCTGTA TTAGAAAAAG TTATGACACA TTTTGCTTCG
CAAAACCCGC GAATAGATAA AACCGATGGT GTGAGCTTGG AATTTGATGA TTGGCGCATG
AATATTCGTG CTTCTAATAC GGAACCGTTG TTAAGATTAA ATGTAGAGAC TAAAGAGGAT
AAATCTTTAG TTTGGAGTAA GGTTAAAGAA ATAGAAAAGC TAATAGAAAC TTAA
 
Protein sequence
MDDNIKSLSS FKAYDIRGKV PEDLNETLAY KIGKAYVAEL GAKRVVVGYD IRLESQSLAD 
ALKKGLTEAG ADVLDIGLCG TEEVYFSTFY HKTDGGIMIT ASHNPKGYNG MKLVASGSKP
ISGDTGLKEI ERRVIEEDFK HSESTQNQPG LVISETDKSA YIDHLLSYVD LSKLKPLKIV
MDAGNGSAGA VIKQISERLP FKCFFVNEVP DGNFPNGVPN PLLPENRSTT SDAVKQHQAD
FGVAWDGDFD RCFLFDENGD FIEGYYLVGL LAETLLAKNP GEKVIHDPRL TWNTIDQVQQ
AGGVPVQSKT GHAFIKERMR LEDAIYGGEM SAHHYFKDFA YCDSGMIPWL LIAELMSKTG
KSLSSLVSER MQAYPCSGEI NYTVNDVPAV LEKVMTHFAS QNPRIDKTDG VSLEFDDWRM
NIRASNTEPL LRLNVETKED KSLVWSKVKE IEKLIET