Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1670 |
Symbol | |
ID | 3760948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1823456 |
End bp | 1824349 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637786407 |
Product | putative signal transduction protein |
Protein accession | YP_391936 |
Protein GI | 78486011 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAGCAG TTCAAGATGT TCAAGAAAAA AAACAAGCAA AGCCCAATGT CAGTCGAGTT ATTTTAGAAA GATTAAAAGT ATTGGATGAT TTGCCTCGCT TTCCTAATGC GTTGATGAAA TTAGAGCAGA TGCTCTCTTC GAATAAGGAT GTTCATTTAG ACGAGGTCGC CGCTTTAGTG GCACAGGACC CGCGTTTAAC TGCGGGTATT ATCGGTGCCG TCAATTCTGC GCGTTATTCC CCCGGTTATA ACATTACCAA TATTGAAGAA GCGGTTCAGC GTCTTGGCAC TCAGGATGTG CGAATGATGG CGCATGCCAT TAACTACCAG TCGACGGTTA AAACAAAGCC CCCTTTCAGC GAAAAAGAAT TTATGCGACA TGCCATGCTG TCGGCTTTTA TTGCACAGGC TTTGGCAAAG GCGGTTCACT TTGATCAAGG AGAAGCCTTT TTATGTGGTT TGATGCATGA TCTGGGCGCG TATTTATTGG CGATAGAAAG TCGTGATAAA TACAAACAAG TGATGCAGGA TTCTGCAGGC GATGCGGCGT TTTTTGTGCA GGCAGAGCAG TCTGTTTTTG GGACAAACCA TGCTGTTTTA GGTGGGCGTT TATTACAGCA ATGGCGTTTT CCGAAAGAGG TGGTGATGGG GGTTGCCCTG CATCATGCGC CGCATACGGC ACCAGAAGAA TTTCAAAATT ACGCCTACTT AACGTATTTA GCGGAACAGG GCGCCTTTTT CGGTGGATTA ACGAATGGCG TTGTAACGCA TAAAGGGGAT ATTCCGACCG ATACCTTATT GAATGGATTG GACTATTTTG GATTAACGCT TGAGCACTAT AATGACTTGG TGCTTAGTGC GACAGAGCTG GCAAAAGAAT CGAGTTTAAT TTAA
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Protein sequence | MSAVQDVQEK KQAKPNVSRV ILERLKVLDD LPRFPNALMK LEQMLSSNKD VHLDEVAALV AQDPRLTAGI IGAVNSARYS PGYNITNIEE AVQRLGTQDV RMMAHAINYQ STVKTKPPFS EKEFMRHAML SAFIAQALAK AVHFDQGEAF LCGLMHDLGA YLLAIESRDK YKQVMQDSAG DAAFFVQAEQ SVFGTNHAVL GGRLLQQWRF PKEVVMGVAL HHAPHTAPEE FQNYAYLTYL AEQGAFFGGL TNGVVTHKGD IPTDTLLNGL DYFGLTLEHY NDLVLSATEL AKESSLI
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