| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1655 |
|---|
| Symbol | |
|---|
| ID | 3760933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 1809124 |
|---|
| End bp | 1810479 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637786392 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_391921 |
|---|
| Protein GI | 78485996 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTATTCCCAC AAATTTGTTT AAACTGATCA GTATTCTTTT TATTCTCACG
CCTTTTTTTG CTTGGTCCGC ACCGCAAGAA ACTTTGATTG ACCGAGTCGT TGCCGTCGTC
AATGACAACA TAATTTTAAA AAGTGAACTG GATGCGGAAG TCAATCTGGC CAAGCAAGAT
TTGCAGGCTC GAAACATTCC GGTGACCAAC CCTGAAGAAC TCGCCTCAAA AGTTCTTGAT
AAAATTATTT TAGAACGCTT ACAACTGCAA AGAATCAACC AACTGGGTAT TAAAATCGCG
GATGATGAAC TCTTTTCTCA AATCCAGGAA ATCGCCAAAC AAAATAACCT GACCGTCATC
GAGCTCCGTG ATCGTTTAAA CATGTCTCAG AAGAATGGAT TTGAAAGCTT TCGCGAACGT
ATTCGTCAGC AAATGCTTTT TCAAAAATTA CGGGAAGTCG AAGTTCTGTC TAAAACGCAA
GTGACCGAAG ATGAAGTCTC AAACTTTATT CAACGACAAG CACTCGTGCA AAGTGATGTT
GAATACCATC TAGGCCATAT CATGGTGAGC TTACCCGAGT CGGCCACCCC TGACCAACGT
GATGCATCTA AACAAAAAGC GCAGGAAATT TTACAAAAAA TCCGTACCGG TGGAGACTTC
AGTCAAATGG CTGTGCGTTA TTCAGAGGGA AGCAAAGCCC TACAAGGTGG TGATTTAGGC
TGGTTAGGAA TCGATCAGAT CCCAACCTTC TTTAACGATG CGTTGAACCA ACTGGAAATC
GGCGAAACCA GTGATGTCAT CCGAAGCCCT GTCGGGTTTC ATATCATCCA ACTGCAAGGC
AAGCGCAACA AAAACAGTCA GATCGTTAAA CAATATCACC TCTACCGATT TATTCTTTTA
TCCGAAGATG CCCAGAACAA ACAACAGCCA AGCCCAACAT TGGTTAAATT GGCTGAAAGC
TTGAACAGCT TAGAATCGTT TAAACAACTG AACGAAAAAT ATTCTGACAT CCCCGCCTCA
GTGAACGCCA ACGGCAATCT AGGCTGGCAA ACGGCGAAAG AAATGTCACC GGAATATTAT
CAGGCCATCG AGGCCCTTCA ACCCGGCCAC GCGGCCAAGC CTTTTGCAAC CGAAAAAGGA
TGGGTGATTC TTTTCTTGGA TGGCATTCGC GATCAAGACT TATCGTTAAA GGACAAACGC
AAGCAAGCAA TGCAAACATT ACGCATGAAA AAAGCCAATG AATCTTATGA AATTTGGTTA
CGTCGCCTAA AAGATGAAGC GTTAATCGAT ATTCGACTCG AAGATCCTGA AATCATGAAA
AAGCAACCAA GCCATGAAGA GGCCAACGCT AATTAA
|
|---|
| Protein sequence | MKKIIPTNLF KLISILFILT PFFAWSAPQE TLIDRVVAVV NDNIILKSEL DAEVNLAKQD
LQARNIPVTN PEELASKVLD KIILERLQLQ RINQLGIKIA DDELFSQIQE IAKQNNLTVI
ELRDRLNMSQ KNGFESFRER IRQQMLFQKL REVEVLSKTQ VTEDEVSNFI QRQALVQSDV
EYHLGHIMVS LPESATPDQR DASKQKAQEI LQKIRTGGDF SQMAVRYSEG SKALQGGDLG
WLGIDQIPTF FNDALNQLEI GETSDVIRSP VGFHIIQLQG KRNKNSQIVK QYHLYRFILL
SEDAQNKQQP SPTLVKLAES LNSLESFKQL NEKYSDIPAS VNANGNLGWQ TAKEMSPEYY
QAIEALQPGH AAKPFATEKG WVILFLDGIR DQDLSLKDKR KQAMQTLRMK KANESYEIWL
RRLKDEALID IRLEDPEIMK KQPSHEEANA N
|
|---|
| |