Gene Tcr_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1638 
Symbol 
ID3761935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1790981 
End bp1791610 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID637786375 
Productlipoate-protein ligase B 
Protein accessionYP_391904 
Protein GI78485979 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00770043 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTTC AAGTCAAATA CCTAGGCTTA CAACCCTACG AGTCAACCTG GGAAGCGATG 
CAGCGCTTCA CGAATGAACG CACCGAGCAC ACGCCAGACG AACTCTGGGT GGTTGAACAC 
CCTCCTGTTT TTACACAAGG CCTAAACGGT CAAGCAAAAC ACCTTCAAGC CTTTGCGTTG 
GAACAAAACA TCCCCATTAT TCAAACGGAT CGAGGGGGAC AAGTGACCTA TCATGGTCCC 
GGTCAAATCA TTATCTATGT GCTACTCGAC TTAAAACGCG CTCAATTAGG GGTTCGCGAC 
TTAGTGCATC GAATGGAAAA AGCTATTATT GAATTTTTAT GCGATTTAAG TATTTCAGCC 
GACGCTCGAC CAGACGCTCC TGGGGTTTAT GTGGATGGTC AAAAAATCGC CTCTTTAGGA 
CTCAAAATTC GAAAACAAAA AAGCTATCAT GGCTTGGCTC TCAATTTTGA TATGGATTTA 
ACGCCTTTTA GCTGGATTAC GCCTTGCGGT TTAGAAGGCA TACAGATGAC ACAGGTCTCC 
CACTTTATCC AACAACCTGA TCAGCTCGCC AGCCAAACCG CATTAATTAA AGCATTGTGT 
CACCAATTAC AGCCGGAAAT CGATTCTTAA
 
Protein sequence
MPLQVKYLGL QPYESTWEAM QRFTNERTEH TPDELWVVEH PPVFTQGLNG QAKHLQAFAL 
EQNIPIIQTD RGGQVTYHGP GQIIIYVLLD LKRAQLGVRD LVHRMEKAII EFLCDLSISA 
DARPDAPGVY VDGQKIASLG LKIRKQKSYH GLALNFDMDL TPFSWITPCG LEGIQMTQVS 
HFIQQPDQLA SQTALIKALC HQLQPEIDS