| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1636 |
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| Symbol | |
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| ID | 3761933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1789779 |
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| End bp | 1790654 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637786373 |
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| Product | aminotransferase, class IV |
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| Protein accession | YP_391902 |
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| Protein GI | 78485977 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000322319 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAA CAGGGCAAAT AGCTTACTTA AATGGCGAAT TCATTCCCAT TGAGAAAGCA
CAAATATCTC CCCAAGATCG TGGTTTCCTA TTTGGGGATG GTGTTTATGA AGTTATTCCT
GTTTATGGTA AAAAACTTTT TACGTTTCAA GACCATCTGG AACGGCTAAA AAACAGTTTA
AAAGCCACCT CGATTCTAAA CCCTTTAGAG GATGATGCTT GGGAGCGTTT GTTACAAAAA
TTGGTCGATA TGCACCCTTG GAAAAACCAG TATATTTATT TACAGGTCAC ACGAGGCGTT
CAGATGCAAA GAGATCATTT GCCGGCTGAC TGCTTATCGC CAACGCTATA TGCTTACTCT
AATGAGCTCA AACCCCTCTC AGAAACCATT ATCAACCAAG GGGTCAAGGT GATCACCTTA
GATGATATTC GTTGGCTTCG TTGCGACATT AAAGCCATCA CCTTATTGCC AAACATCATG
ATGAAGATGG CAGCTAAAAA CCAAGGCGCA GACGATGCCA TTCTTATCGA CCGAGACGGA
CATGTCGCTG AAGGCACCTC TAACAACGTC TTCATCGTGA AAGACAACGC CTTATTTACG
CCTAAAAACG GATCACGCAT TCTTCCGGGC ATCACACGGT CGGTAGTTCA GTCCTTAGCG
GAACAACATA GTTTGCCTCT TACGGAAATG GATTTAACCT TATCTGATTT AGAAAATGCA
GATGAAATCT GGCTGACCAG CTCGACCAAA GACGCACTTC CAGTGACGGA GCTGAATGGC
CAACCTGTTG GTCAAGCCAA ACCGGGACCT GTCTGGCAAA AAATTCAGCA GTATTTTGAA
GAAACCAAAC AACACTTTAT CCAACAGTTA ACTTAA
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| Protein sequence | MQKTGQIAYL NGEFIPIEKA QISPQDRGFL FGDGVYEVIP VYGKKLFTFQ DHLERLKNSL
KATSILNPLE DDAWERLLQK LVDMHPWKNQ YIYLQVTRGV QMQRDHLPAD CLSPTLYAYS
NELKPLSETI INQGVKVITL DDIRWLRCDI KAITLLPNIM MKMAAKNQGA DDAILIDRDG
HVAEGTSNNV FIVKDNALFT PKNGSRILPG ITRSVVQSLA EQHSLPLTEM DLTLSDLENA
DEIWLTSSTK DALPVTELNG QPVGQAKPGP VWQKIQQYFE ETKQHFIQQL T
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