Gene Tcr_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1631 
Symbol 
ID3761928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1784148 
End bp1784996 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content42% 
IMG OID637786368 
Productrod shape-determining protein MreC 
Protein accessionYP_391897 
Protein GI78485972 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.017053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTATTA ACCTCAGCAC GACATCTCCT CAAAAAGAAG GAACACAGTT CCTTTTATTT 
TTTATCCTGA GTATCGCATT AATGGTAATG GATCATTACA GCCATTTACT TTCCAATTTT
CGCAACGTGT TACTCACCAC AATCGATCCA ATTGAGCGAA CGGCCACCTT GCCGCTAGAC
ATCTATAACT GGATGCAGCA GGACTACACC ACCATCAATC AGCTACAAAT GCGAAATCAA
CAACTGGAAA CGGAAAACTT GCTTCTTAAA GCTCAACAAC AACAAATGGG CAAACTCAAA
CTGGAGATTA GCCGTTTAAA CCGTTTACTA GGGACCGCCA GTCAAATGAG CTCTTCCAGT
GTTCAAATTG CCAATGTAAG TTCTTATAGC GAAACACCTC TAGCGCAGTT TTACACGTTA
AACAAAGGTT CTTTAGATGG GGTTAAAATC AATCAAACCG TTATCGATGC TAAAGGTTTA
ATCGGGCAAA TCACCTCTTT AACTCCGTCG TCTTCACGTG TTCAATTGAT TACAGACCCA
GACATTCAAG TGCCTGTAAG GATTCAACGT ACGGGTCAAC GTGGCATCCT AAATGGGTTA
GGGCACAACC AATTGTCATT GATGTTTATT CCAAACTCCA GTTCAATCAA GGAAGGTGAT
TTACTTGAAA CGTCAGGGCT GGGAGATGTT TTCCCGGAAG GACATCCTGT AGCCATTGTT
AGGCAAGTGA ACATTCTAAA GGGTGAGCCT TATTATGAGA TTTTTGCGCG ACCTGTTGCA
GATTTAAATC TGTCTCAAAA AGTGCTGATT TTGTCGAAAA AAACGGAGCG TGACAACCAT
GTCCGATAA
 
Protein sequence
MTINLSTTSP QKEGTQFLLF FILSIALMVM DHYSHLLSNF RNVLLTTIDP IERTATLPLD 
IYNWMQQDYT TINQLQMRNQ QLETENLLLK AQQQQMGKLK LEISRLNRLL GTASQMSSSS
VQIANVSSYS ETPLAQFYTL NKGSLDGVKI NQTVIDAKGL IGQITSLTPS SSRVQLITDP
DIQVPVRIQR TGQRGILNGL GHNQLSLMFI PNSSSIKEGD LLETSGLGDV FPEGHPVAIV
RQVNILKGEP YYEIFARPVA DLNLSQKVLI LSKKTERDNH VR