Gene Tcr_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1625 
Symbol 
ID3761922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1777801 
End bp1778244 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content41% 
IMG OID637786362 
ProductFe-S metabolism associated SufE 
Protein accessionYP_391891 
Protein GI78485966 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00154018 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACG CACCGGCTGA AAAAACCTTA TCTGAAGTTC AGGCAGATTT GGTGAAACGC 
TTTACCCATT TTGATAACTG GAAAGATCGT TATAAATATT TAATCGATAT GGGCAAACAA
CTTCAGAACA TGCCTGACGA ATATAAAACT GAAGAAAATC GTATTCATGG TTGTCAGTCT
CAGGTTTGGA TTCATATTGA AGAGAAAGAC GGCATTCTTT ATATGGAAGC CATGTCCGAT
GCAGCCATTG TCTCAGGGTT AATTGCATTG TTACTTAAAA TATACAATGG CCGAACCCCT
CAAGAAATTG CAACAGCGCC ACTGGATTTT CTAGGCGAAA TTGGGTTGTT ACAACATCTT
TCTGCCAACC GTTCCACCGG GCTTTACCAT ATGATCAAGC GCATTCAAGC GGAAGCGAAT
GCCCACTTAG CCCCACCTTC TTAA
 
Protein sequence
MNYAPAEKTL SEVQADLVKR FTHFDNWKDR YKYLIDMGKQ LQNMPDEYKT EENRIHGCQS 
QVWIHIEEKD GILYMEAMSD AAIVSGLIAL LLKIYNGRTP QEIATAPLDF LGEIGLLQHL
SANRSTGLYH MIKRIQAEAN AHLAPPS