Gene Tcr_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1620 
Symbol 
ID3760880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1773818 
End bp1774645 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content44% 
IMG OID637786357 
Productphosphoserine phosphatase SerB 
Protein accessionYP_391886 
Protein GI78485961 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAA TTATTATTCA TGAAAACGCT TTAACCTTCG AACAAAGTAA TCAAATCAAG 
CGTGCCCTAG CGGTTCCTAA AAAAGTAGAC AACCATTTTC GCGTGACCGT AGACGAATGC
TCTGCCGAAA AAATTGCTGA GTTGTCTGAA AAGTTGTCCA TCGATATGAA CATCTTGCCT
GAGCATTTTA ATGCCGCCGA TATCAAACTT CTCATCAGTG ACATGGATTC AACCCTTATC
GGCATTGAGT GTGTTGACGA GATTGCCGAC ATGATGGACC TCAAACCACA GGTATCCGAA
ATTACCGAAG CGGCCATGCG AGGCGAACTC AACTTTGAGT CGTCGTTAAC CAAACGTGTC
GCTTTACTCA AAGGCTTGAA CACTTCGGCA TTACAAAAAG TATTCGACGA ACGGTTGTTT
TTAAACCCTG GTGCTGAAAC TTGGATTGCA GGACTTAAAG AAAAAAATAT CGCCTTTGCA
CTGGTTTCCG GTGGTTTCAC GTTCTTCACC GATCGTTTGA AAAAACAGCT GGAACTCGAT
TATGCCAGAG CTAACGTCCT TGATGAAGCC GAAGGATGCT TAACAGGAAA AATTCAAGGT
GACATTGTTG GGGCGGAAGC CAAAGCTGCT TTCTTGCAAG AAATTTGTAA CGAAATGGGC
ATCAGCCTGA ATCAAACCAT CGCCATTGGT GATGGCGCCA ATGACTTGCT GATGATGAAT
GAAGCGGGCT TAAGCATCGC TTACCATGCA AAACCCAAAG TACAAGCGCA GTCAGATGTT
GCCATCAATC GTGGCGGCCT GGATAAAGTA TTGGATTTTT TAGCGTAA
 
Protein sequence
MTTIIIHENA LTFEQSNQIK RALAVPKKVD NHFRVTVDEC SAEKIAELSE KLSIDMNILP 
EHFNAADIKL LISDMDSTLI GIECVDEIAD MMDLKPQVSE ITEAAMRGEL NFESSLTKRV
ALLKGLNTSA LQKVFDERLF LNPGAETWIA GLKEKNIAFA LVSGGFTFFT DRLKKQLELD
YARANVLDEA EGCLTGKIQG DIVGAEAKAA FLQEICNEMG ISLNQTIAIG DGANDLLMMN
EAGLSIAYHA KPKVQAQSDV AINRGGLDKV LDFLA