Gene Tcr_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1611 
Symbol 
ID3760871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1764839 
End bp1765405 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content40% 
IMG OID637786348 
Producthypothetical protein 
Protein accessionYP_391877 
Protein GI78485952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.297862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTCG CATTAGGTGC AAAAGAAGTT CAAGAAACCA TAATGGTTTT AAATTTATCG 
GTTGCTCAGA TTGAGTTGTC TATTTCAGAA GGCGATAATT CGGTTAACAC CTTGATTGAT 
TCCTTTACGT ATATGTCTGA GCATATTGAA GCGATAGAGT TATCGAGTCA AAAAATTGCT 
GAGATGTCGA ATGACGTTGT GGGCATTGCA GAGCACAACC AGTCTTTATT GGTTCAAACC 
AATGATTTGG CGCAAAAAAT GCAACAAGCA ATTATTGCCT TTCAGTTTTA CGATAAGTTG 
AGCCAACGAT TAAATCATGT ATCACATGGC TTGTCAGGCC TGGCTGAAAT TGTCTCGCAT 
GAAATGCACG CTAAAGATGA AGCGCAATGG AAAGCCTTTA AATCGGAAGT TCGAAAAGGC 
ACTACGATGC GTGAAGAAGA AGAGTTATTT GAATTGATTT TTGATGAGAA AAAACCGGCA 
GAAGAGGCCA TTGAAATCAT GAAGACGCGA ATGCGCGATA GAATGAATGC CGCGGAAGAG 
GTAGAAGAAG AAATTGAGTT TTTCTAG
 
Protein sequence
MPFALGAKEV QETIMVLNLS VAQIELSISE GDNSVNTLID SFTYMSEHIE AIELSSQKIA 
EMSNDVVGIA EHNQSLLVQT NDLAQKMQQA IIAFQFYDKL SQRLNHVSHG LSGLAEIVSH 
EMHAKDEAQW KAFKSEVRKG TTMREEEELF ELIFDEKKPA EEAIEIMKTR MRDRMNAAEE 
VEEEIEFF