Gene Tcr_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1606 
Symbol 
ID3760866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1756711 
End bp1758297 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content43% 
IMG OID637786343 
ProductABC transporter related 
Protein accessionYP_391872 
Protein GI78485947 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTTCAA CTGCAAATAT TACCATGCAA TTTGGCGAAA AGCCGCTTTT CGAAAATATC 
AATATTAAGT TTGGTAACGG TAACCGGTAT GGTTTGATTG GCGCGAACGG TTGTGGGAAA
TCAACCTTTA TGAAAATTTT AGGGGGAGAT TTAACCCCTA GTTCTGGCCA AGTAATGTTG
GATCCCAACG ATGTTTTGGG GAAGTTGAAG CAGGATCAGT TTGCCTATGA AGACTATTCC
GTTGTGGACA CCGTTATTAT GGGAGACACG GAACTTTGGG AAGTCAAAAA AGAACGTGAT
CGCATTTACA GTTTGCCAGA AATGTCTGAA GAGGATGGCA TTAAGGTAGC TGAGTTGGAA
GTGGCGTTCG GTGAAATGGA TGGTTACACA GCCGAATCTC GGGCGGGTGA ATTATTACTC
GGTCTAGAAA TTCCGGTGGA GCAGCATTTT GGACTGATGT CTGAAATTGC GCCCGGTTGG
AAGCTTCGAG TTTTGTTAGC TCAGGCGTTG TTTGCTAATC CAGATATCTT ATTGCTTGAC
GAACCAACCA ACAACTTGGA TATCAATACC ATCCGCTGGC TGGAAGGGGT GCTGAATGAA
CGTAAAAGCA CCATGATTAT TATTTCGCAT GACCGTCACT TCTTAAACTC GGTATGTACG
CATATGGCGG ATTTAGATTA CGGGGAACTG AACATTTATC CTGGTAATTA TGATGAGTAC
ATGTTTGCGT CCACTCAGGC ACGTGAACGT TTATTGTCGG ATAATGCTAA AAAACAAGCT
CAAATCAATG ACCTTAAAAG CTTCGTAAGC CGTTTTTCTG CGAATGCTTC CAAAGCCAAG
CAAGCCACAT CACGACAAAA ACAACTGGAT AAGATCGAGT TGCAAGAAGT GAAGCCTTCT
AGCCGAGTCA ATCCTTTTAT TCGTTTTGAG CAGGATAAAA AGTTATTCCG TTTGGCGTTA
GAAATCGAGC ATTTAACCAA ATCATACGGC GAACTTAATA TCTTTAAAGA CATGAATATG
ATGCTTGAAG CGGGTGAGAA GCTCGCGGTG TTAGGCCCTA ACGGGATTGG TAAAACCACT
TTCTTGAAAA CCTTGGTGGG CGATACAGAG ATTGACTCAG GCAAAGTGAA ATGGTCTGAG
AATACTCAGA TTGGTTATTA TGCTCAGGAT CATGCGCATG ATTTTGAAGA AGACATAACC
CTGCTGGACT GGATGTCACA ATGGAAAGCA GAGAGTGATG ACGAGCAGGC TGTTCGTGCC
GTATTGGGTA AGATGTTGTT CTCTCAAAAA GAAATCGATA AGTCGGTAAA AGTGTTGTCT
GGGGGCGAGC AAGGTCGTAT GCTGTTTGGT AAGTTGATGC TGCAAAAACC CAATGTACTG
ATTATGGATG AGCCAACCAA CCATTTGGAT ATGGAATCGA TTGAATCGTT GAACCAAGCT
TTGGAAGAGT TTGAAGGAAC GGTTATTTTT GTGTCACATG ACCGTGAATT CGTTTCCTCG
CTGGCCACCC GTTTATTAAT GATGTCGCCT GACGGAGTGG ACGTTTATCA AGGAAATTAT
GAGGCCTATT TAGAAGAAAA TGCCTAA
 
Protein sequence
MISTANITMQ FGEKPLFENI NIKFGNGNRY GLIGANGCGK STFMKILGGD LTPSSGQVML 
DPNDVLGKLK QDQFAYEDYS VVDTVIMGDT ELWEVKKERD RIYSLPEMSE EDGIKVAELE
VAFGEMDGYT AESRAGELLL GLEIPVEQHF GLMSEIAPGW KLRVLLAQAL FANPDILLLD
EPTNNLDINT IRWLEGVLNE RKSTMIIISH DRHFLNSVCT HMADLDYGEL NIYPGNYDEY
MFASTQARER LLSDNAKKQA QINDLKSFVS RFSANASKAK QATSRQKQLD KIELQEVKPS
SRVNPFIRFE QDKKLFRLAL EIEHLTKSYG ELNIFKDMNM MLEAGEKLAV LGPNGIGKTT
FLKTLVGDTE IDSGKVKWSE NTQIGYYAQD HAHDFEEDIT LLDWMSQWKA ESDDEQAVRA
VLGKMLFSQK EIDKSVKVLS GGEQGRMLFG KLMLQKPNVL IMDEPTNHLD MESIESLNQA
LEEFEGTVIF VSHDREFVSS LATRLLMMSP DGVDVYQGNY EAYLEENA