Gene Tcr_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1603 
Symbol 
ID3760863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1753889 
End bp1755034 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content43% 
IMG OID637786340 
Productglycosyl transferase, group 1 
Protein accessionYP_391869 
Protein GI78485944 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTGT TTTTATTTAC CGATACGCTT GGCGATTTAA ATGGCGTTTC CCGTTTCATC 
CAAGACATGG GCGAGCAAGC AGACCACCAT CCAGACGTTA ATTTTGAATT ACACATCGCA
ACATCAACCT CAAAACCCAT TCCAGACACC TCCTATATCC ATAATTTGCC CTATCGTTTA
AAGGTGGCCA TGCCATTCTA TCAAGAACTC GATTTAGTAT TACCCGATCG CAAAGCCATT
CGCCAATTCT TAATCAAGCA GCAACCCGAT CATGTCCATA TTTCAACTCC AGGGCCTTTT
GGCTGGGCCG CCAAAAAAGA AGCTGAAAAA CTGTCGATTC CTTTGTTTGG TACCTATCAC
ACCGATTTCC CAGCGTATTT ATATGATTTA ACCCGATCAC ACTGGGTCAA AAAACAGACG
GATAAAATCA TGACCCGGTT TTATCAGAAC TTTGCACACA TTTTCTCTCG ATCGGATACC
TATATCGACA TCCTGCAAAA AGACCTTAAG CTGCCGAAAG ATCGTCTCTC TACCCTTTTC
CCTGGCACCC ATTTACAGAG ATTCCACCCC GACCACCGCT CGCCATTCAT TTGGGAAGCA
TTTAACTTAC CCCCTCAACG CTTAAAAATT TTGTATGTCG GGCGCATTAA CATCGAAAAA
AACATCCCTT TTTTACTGGA AGTTTGGCAA ACGCTCTATC AAAAGAACCC TGACTTAAAA
GCCGACTTAA TTCTGGTAGG AGAGGGACGC TATCGAAAAT GGGCGGATAA AATGCGTCCG
TTTCATATTC ACTTTATCGG TCCGATTCAA GGCCAAACTC TATCCGAACT TTACGCGTCT
TCAGATTGCT TTGTTTTTCC GTCCACCACC GATACGTTAG GACAGGTTAT TATGGAAGCA
CAAGCCAGTG GCCTTGGGTG TTTGGTTTCA GATAAAGGCG GCCCGCAAAG CCTTCTTCAT
AAGAACAGTG GTCAAGTTAT TGAAGCGAAT AATATCCAGG CCTGGGTTAA TGCGCTTCTA
GAAGTGTTAA CTAATGAAGA AATACGTAAC CTTTGGGCAA ACAACAGTCG ACCGAATGCG
GAGCAATATG ATATTGTTAA GTCTTTTCAA CAATTCCGAT ATCAACACTT AACAGAAGTA
CCTTAA
 
Protein sequence
MKVFLFTDTL GDLNGVSRFI QDMGEQADHH PDVNFELHIA TSTSKPIPDT SYIHNLPYRL 
KVAMPFYQEL DLVLPDRKAI RQFLIKQQPD HVHISTPGPF GWAAKKEAEK LSIPLFGTYH
TDFPAYLYDL TRSHWVKKQT DKIMTRFYQN FAHIFSRSDT YIDILQKDLK LPKDRLSTLF
PGTHLQRFHP DHRSPFIWEA FNLPPQRLKI LYVGRINIEK NIPFLLEVWQ TLYQKNPDLK
ADLILVGEGR YRKWADKMRP FHIHFIGPIQ GQTLSELYAS SDCFVFPSTT DTLGQVIMEA
QASGLGCLVS DKGGPQSLLH KNSGQVIEAN NIQAWVNALL EVLTNEEIRN LWANNSRPNA
EQYDIVKSFQ QFRYQHLTEV P