| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1601 |
|---|
| Symbol | |
|---|
| ID | 3760861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 1752299 |
|---|
| End bp | 1753366 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637786338 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_391867 |
|---|
| Protein GI | 78485942 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATA AACTTTATCA AAATACTCAG CAGGAAAACT GGTTAGACAC CAAAGGTATT
CAACGACTCA CACTGGTTTC GGATGCGTGG CGACCGCAGG TGAATGGTGT GGTCACCACG
CTAACGCAAC TTGTTCAACA ACTGCAAAAG GCGGGGATTG AGGTTGATGT CATTCACCCA
AATGATTACA CAACAATTCC CTTACCAACC TATCCCGAAA TTCCTTTTGT ATGGCGAGCA
GACGGTTTGG AAAAACGAAT TACTGGCTTT AATCCCGATG CAATCCATAT CGCAACCGAA
GGGGCTTTAG GCTGGAAAGC CAGGCGCATC GCCTTAAGAC ACCGTTTACC TTTTACAACG
GCCTACCACA CCAAGTATCC GGAATATATC CACAAACGCT TTCCCATCCC AACACGCTGG
GTATATCATA TTTTAAAACG ATTTCATCGA CCGGCTTATA ACACGTTTGT GCCCGCCCCC
TCGATCTTGA CCGAGCTGAA AACAAAAGGA TTTCCCCATC TTGTCTTAAT GACACGCGGA
GTCGATACTG AACTGTTCAA CCCAAGTCGA GCCCATAACC TGGCGCAGCA AAAACCTTGT
TACTTATATG TAGGGCGCGT GGCGCCGGAA AAAAACATCA CGGCTTTTTT AGACCTTCAA
CTTCCTGGAC AAAAAATTGT GGTAGGAAAA GGACCCGATC TTGAGAACCT GAAGGCGGCA
TACCCTGATG TGGATTTCGT CGGCCCTAAG GCCGGAATCG AACTGGCAGA ATATTATGCC
AATGCCAATG TGTTTGTTTT CCCTTCTTTA ACGGACACCT TCGGCGTGGT TAACTTAGAA
GCCATTGCCT CAGGAACCCC TGTGGCAGCT TTTCCAGTCA CGGGTCCGAA AGATATCATT
ACTCAAGGTG TCAACGGAAT TTTGGATCAC AATTTGAAAA CCGCCATTGA AAAAGCGAGT
TTATTGAAGG CTCCTCATAG CATTGCCAAT TCCATTCCCG ACTATACCTG GCAAGCGGCA
GCACAACAGT TTCTGAATCA CTTGGCCATC ACTCCTAAAT CGACTTAA
|
|---|
| Protein sequence | MTNKLYQNTQ QENWLDTKGI QRLTLVSDAW RPQVNGVVTT LTQLVQQLQK AGIEVDVIHP
NDYTTIPLPT YPEIPFVWRA DGLEKRITGF NPDAIHIATE GALGWKARRI ALRHRLPFTT
AYHTKYPEYI HKRFPIPTRW VYHILKRFHR PAYNTFVPAP SILTELKTKG FPHLVLMTRG
VDTELFNPSR AHNLAQQKPC YLYVGRVAPE KNITAFLDLQ LPGQKIVVGK GPDLENLKAA
YPDVDFVGPK AGIELAEYYA NANVFVFPSL TDTFGVVNLE AIASGTPVAA FPVTGPKDII
TQGVNGILDH NLKTAIEKAS LLKAPHSIAN SIPDYTWQAA AQQFLNHLAI TPKST
|
|---|
| |