Gene Tcr_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1595 
Symbol 
ID3760855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1747427 
End bp1748290 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content45% 
IMG OID637786332 
Productthioredoxin 
Protein accessionYP_391861 
Protein GI78485936 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.385204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCAA TGATTATCGA TGTCACTCAG GACAATTTTG ACGAAATGGT ATTAAACAAT 
TCCATGCATG TCCCGGTTCT GGTTGATTTC TGGGCCCCTT GGTGCGGCCC TTGTAAACAA
GTCATGCCGA TGTTGGAAAA GCTCGCGCAT GACCTCGCCG GACGATTCAT TCTGGCAAAA
GTAAATACTG AAGAACAAGA AGCGTTGGCG ACGCAATATC AAATTCGCAG CATCCCAAGC
TTTAAAATCT TCCATCAAGG TCAAATGGTA CAGGAACTTC AAGGAGCACA ATCCGCTTCC
GATTTCAGAG AAGCGTTAGA ACCGTATTTA AAACCAGACC TGTCAGAAGA CTTAAGACAG
CAAGCGCAAC AGGCGTTTAA TGCTGGCGAA TATGACCAGG CGGTAAAATT ACTGGGAGAC
GCATCTGAGG CCAATCCGAA TAACTTTCGA ATTCATTTAG ACTTGGCCAA AATGTACTTC
CAAAGCGGCC ATTTGGACAA AGCCGAATCG TTAATGGAAA AATTACCCGA TGAGGCCAAA
CAGTCGAAGG AAGGGAAGTC GCTACAAGCG TTATTTAAAT TTACGCAAAT TGTCGCGAAT
GCGGACGACA TTGAAACGGT GCAGAAAACC TTACAGAACG ACCCAAACAA TGCAGAAGCT
CTGTATCACC TTTCCGGGTA CTTGATGCTG CACAATCATC CCGACAAGGC GATGAGTTGC
TTGCTCAAAC TCTTCTCCGT GGCGCCCGAC TATCAAGACG GGGTGGCGAA AAAAACTTTG
ATTGAAACGT TTGAAATGTT ACAGGACGAA CGCCCTGAAC TGGTGAACAC CTATCGTCGA
CAATTACAGA ACTTACTTTT TTAG
 
Protein sequence
MEAMIIDVTQ DNFDEMVLNN SMHVPVLVDF WAPWCGPCKQ VMPMLEKLAH DLAGRFILAK 
VNTEEQEALA TQYQIRSIPS FKIFHQGQMV QELQGAQSAS DFREALEPYL KPDLSEDLRQ
QAQQAFNAGE YDQAVKLLGD ASEANPNNFR IHLDLAKMYF QSGHLDKAES LMEKLPDEAK
QSKEGKSLQA LFKFTQIVAN ADDIETVQKT LQNDPNNAEA LYHLSGYLML HNHPDKAMSC
LLKLFSVAPD YQDGVAKKTL IETFEMLQDE RPELVNTYRR QLQNLLF