| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1590 |
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| Symbol | |
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| ID | 3760850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1739586 |
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| End bp | 1742180 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786327 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_391856 |
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| Protein GI | 78485931 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.136396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGTG CAGAACTCAG AAAAGCATTT TTAGACTTTT TTGTTAAGCA AGGCCATACT
GCTGTGCATT CAAGCCCAGT CGTGCCAGGA AATGACCCAA CGTTACTCTT TACTAACGCA
GGAATGGTTC AGTTTAAAGA AACTTTTCTA GGTCAGGAGA CCCGGGAATA TAAGCGTGCA
ACCAGTGTGC AGCGCTGTAT TCGTGCGGGT GGAAAACACA ATGACTTGGA AAACGTGGGG
TATACCGCCC GTCATCATAC CTTCTTTGAA ATGCTAGGGA ACTTCAGTTT TGGGGATTAC
TTTAAGCGTG AAGCAATTCA ATACGCTTGG ACGTTTTTAA CTGAAGAGCT TGGGCTGCCT
GAAGAAAAGC TTTGGATTAC CGTGTTTGAA GAAGATCGGG AAGCGGAAGA TATCTGGTTG
AAAGAAATGG GTGTCAGTGC CGAGCGTTTC TCTCGTTGTG GTGCCAAAGA TAATTTCTGG
TCGATGGGGG ATACTGGTCC TTGTGGCCCA TGCTCTGAAA TTTTTTACGA TCACGGTGCC
GATGTCGCGG GTGGACCTCC AGGGTCACCC GACGAAGATG GTGATCGTTA TATCGAGATC
TGGAACTTGG TTTTCATGCA GTTCGATCGT TCGGAAGATG GCACTTTAAC ACCGCTTCCA
AAACCGTCTG TCGATACCGG GATGGGCTTA GAGCGTTTGG CTGCAGTCAT GCAAAATCAG
CATAACAACT ACGACATTGA TTTGTTTCAA GCCATTGTTA AGAAAGCCTC TGAGCTGACG
GGCGAAAAAG ATCTGGCCAA CAGTTCTTTG CGCGTCATTG CGGATCATAT TCGCTCTTGT
GCCTTTATGG TTGTGGATGG TGTTCTTCCT TCTAATGAAG GGCGAGGGTA TGTGTTGCGT
CGCATCATTC GACGTGCCAT TCGTCATGGT TATAAGTTAG GCCAAACCGA TATTTTCTTT
TACCAGTTGG TGCCAACGCT GGTAGAGCAA ATGGGAGAAG CCTATCCTGA ATTGGTTAAG
GAACAAGCAA ATGTTGAACG CGCATTAAAA TTAGAAGAAG AACGTTTTGC GGAAACGCTT
GAAAACGGCA TGAAGATTCT GGAAGAAGAC ATCGCTCAGT TAAGCGGTTC TGTGATCAGT
GGTTCAACAG CATTCAAACT GTACGACACT TATGGCTTTC CGCTCGACTT AACGGCCGAT
GTGGCGCGTG AGCGTAATTT GAGTGTTGAT GAAGCTGGCT TTGAACAAGA AATGGAAGCG
CAAAGAGCTA GAGCGCGTTC GGCCAGTAAC TTTGGTGCAC AGAGCAAAAA TAAAGTGGAT
TACACTGGAA GTACTCACTT TATTGGTTAT GAGCAGGATG AAGCCGAAGC GGAAATTGCA
GCCATTTTTG TCGATAACGT TTCAGTGGAG AAAGCCTCTG AAGGTCAAGA AGCGATTGTG
ATTTTGAATC AAACACCGTT TTATGCCGAA TCAGGTGGTC AGGTAGGTGA TCAAGGAAGC
CTGACGGAAG GAATGAACAG TTTTCATGTG GATAATTGTC AAAAACAAGG CGCTGCATTC
CTACATATCG GTAAAGTGAC AGCCGGTTCT ATTTCGGTGG GGCAAACCAT TCTTGCACAC
ATTGATGTGA AAGCCCGTCG TGCGTCCGAG CGTAACCATT CCGCAACGCA TTTATTGCAT
GCCGCATTAA GAACGGTGTT AGGGACGCAT GTGGGGCAGA AAGGGTCGTT GGTACAACCA
GAAAGATTAC GATTCGATTT CTCGCATTTT GAACCGATTT CAGCCGAGCA ACTGCTCGAA
ATCGAACAAC TGGTCAACCA TAACATCATG CTGAATGCTC AAGTTATGAT GGAAGAGATG
GATATTGAAG CCGCTAAGGC CAAAGGCGCG ATGGCGTTGT TTGGTGAAAA GTATGGCGAT
GTGGTTCGAG TGGTTGATAT GGGCGACTTT TCCATCGAGT TGTGTGGTGG AACGCATGTG
AATTGGACAG GTGAAATCGG TCCTTTTCGT ATCACTTCAG AAAGCGGGAT TGCTTCTGGA
GTGCGCCGTA TTGAAGCGGT CACAGGAGAA GCGGCCTGGC AGACGATTTA TGATATGGAG
AAAAGCTTAT TAAACATTGC CGCCAACCTC AAAACCGATA AACCACAAGT TGAATCGAAA
GTGGCTCAAT TAGTGACGGA ACAAAAAGAG TTGGAAAAGC AATTAAAGCA ACTGCAATCA
AAACTTGCTT CTTCTCAAGG AGATGATTTA GCCAGTTCCG TAACGGAAGT GAACGGGGTC
AATGTATTGG CTGCCGAACT AGAAGGAGCC GATGTTAATA CACTTCGCGA AACCCTTGAT
AAGTTAAGAG ATAAGCTTGA ACCAGCTGCC ATTGTGCTTG CCGCCGTGGA TGGTGATAAA
GTGTCTTTGG TTGCTGGGGT AAGTAAATCA ATTACCGGTA ATGTCAAAGC TGGTGAGTTG
GTGAACCATG TAGCACAGCA AGTTGGTGGT AAAGGTGGTG GGCGTCCGGA TATGGCGCAA
GCCGGTGGAA AAGATCCAAG TAAGTTAAAA GAAGCCTTGG CTTCAGTAAA AGAGTGGGTT
GCAACAGTCG CTTAA
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| Protein sequence | MTSAELRKAF LDFFVKQGHT AVHSSPVVPG NDPTLLFTNA GMVQFKETFL GQETREYKRA
TSVQRCIRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKREAIQYAW TFLTEELGLP
EEKLWITVFE EDREAEDIWL KEMGVSAERF SRCGAKDNFW SMGDTGPCGP CSEIFYDHGA
DVAGGPPGSP DEDGDRYIEI WNLVFMQFDR SEDGTLTPLP KPSVDTGMGL ERLAAVMQNQ
HNNYDIDLFQ AIVKKASELT GEKDLANSSL RVIADHIRSC AFMVVDGVLP SNEGRGYVLR
RIIRRAIRHG YKLGQTDIFF YQLVPTLVEQ MGEAYPELVK EQANVERALK LEEERFAETL
ENGMKILEED IAQLSGSVIS GSTAFKLYDT YGFPLDLTAD VARERNLSVD EAGFEQEMEA
QRARARSASN FGAQSKNKVD YTGSTHFIGY EQDEAEAEIA AIFVDNVSVE KASEGQEAIV
ILNQTPFYAE SGGQVGDQGS LTEGMNSFHV DNCQKQGAAF LHIGKVTAGS ISVGQTILAH
IDVKARRASE RNHSATHLLH AALRTVLGTH VGQKGSLVQP ERLRFDFSHF EPISAEQLLE
IEQLVNHNIM LNAQVMMEEM DIEAAKAKGA MALFGEKYGD VVRVVDMGDF SIELCGGTHV
NWTGEIGPFR ITSESGIASG VRRIEAVTGE AAWQTIYDME KSLLNIAANL KTDKPQVESK
VAQLVTEQKE LEKQLKQLQS KLASSQGDDL ASSVTEVNGV NVLAAELEGA DVNTLRETLD
KLRDKLEPAA IVLAAVDGDK VSLVAGVSKS ITGNVKAGEL VNHVAQQVGG KGGGRPDMAQ
AGGKDPSKLK EALASVKEWV ATVA
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