Gene Tcr_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1575 
Symbol 
ID3760834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1724035 
End bp1724481 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content43% 
IMG OID637786311 
Productcytochrome c, class I 
Protein accessionYP_391841 
Protein GI78485916 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT TGGTTTTATT ATTAACAAGT TTGAACCTGG TTGCTTGTTC TTCCAAAGAC 
GATCTCTCTG AAGCCAGCCA AAACACAAAA CGTTGGTATT CATCAAGTGA TGTCAAAATA
GGACAGCACC TCTTCAAACA GCATTGTGCT GTCTGTCATG GAGAAGAAGC TCAAGGATTG
GCCGCCGATT GGAAGCAACC ACTCGTTGAT GGTAGTTACC CAGCCCCACC TCTCAACGGA
ACCGCGCACG CATGGCACCA TTCTCTCAAC GGACTTAACA GAACTATTTT ACAAGGTGGA
ATTCCACTTG GAGGAACTAT GCCGGCATTT AAAAATGAAT TAACACAAAA AGAACGATTA
CAAGCCATCG CTTATTTTCA AAGTTTCTGG TCGGATAAAA TCTACCAGGA CTGGCTAGAA
AGAGGGGGGT TAAAAAATGA CCGATAA
 
Protein sequence
MKLLVLLLTS LNLVACSSKD DLSEASQNTK RWYSSSDVKI GQHLFKQHCA VCHGEEAQGL 
AADWKQPLVD GSYPAPPLNG TAHAWHHSLN GLNRTILQGG IPLGGTMPAF KNELTQKERL
QAIAYFQSFW SDKIYQDWLE RGGLKNDR