Gene Tcr_1566 details

Gene Information

• Locus tag: Tcr_1566
• ID: 3760825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 1716058
• End bp: 1716546
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637786302
• Product: hypothetical protein
• Protein accession: YP_391832
• Protein GI: 78485907
• COG category: [S] Function unknown
• COG ID: [COG2847] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000000291429
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTTTC AATTTAATTT CATCTCAACT TTTTTAACAG CTTGTCTCTC AATATTGAGT 
TTCAATGCTT TCGCCAATGA TGCTTCGGTC ATTGATATTG ATAATGCCTA TATTCGTGAA 
GTGCCTCCAG GTGCCATGGC AACGGGCAGT TTTTTAACAC TTAAAAACAA CAGCGAGCAA 
GAAATTCAGT TAGTAGGCGC GACATCCAAC GTCGCCAAAA GAGTTGAGCT TCATACGCAC 
ATCAATGATA ACGGCGTTAT GAAAATGCGC CAGATCAAGT CCATTTCAAT TGCTGCGCAC 
CAAGAAACCA AACTTCAACC GGGTGGTCTT CATATTATGT TCATCGGATT ACAAAAAGAA 
TTAAAAGAAG GTCAGACCAT ATCAATGACG TTGAAATTTA AAGATGGCAG TCAAAAAGAA 
TTAATGGTTC CGGTTAAATC GGTCATGAAC GCCATGGGCA ACATGAACAA CATGCACCAT 
CATCACTAA 

 

Protein sequence

MRFQFNFIST FLTACLSILS FNAFANDASV IDIDNAYIRE VPPGAMATGS FLTLKNNSEQ 
EIQLVGATSN VAKRVELHTH INDNGVMKMR QIKSISIAAH QETKLQPGGL HIMFIGLQKE 
LKEGQTISMT LKFKDGSQKE LMVPVKSVMN AMGNMNNMHH HH